| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3022 |
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| Symbol | |
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| ID | 3973629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3318379 |
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| End bp | 3319533 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926133 |
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| Product | putative aliphatic amidase expression-regulating protein, AmiC |
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| Protein accession | YP_532886 |
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| Protein GI | 90424516 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.486671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGAA AGACGTATCG GATCGGCGTG ATGCTATCGA CGACGGGCTC CTACGGCGCC
GTCGCGCGTT CGATGCTCAA TGGCGCGACG CTTGCTTTCC AAGAGATTGC CGCTGCGGGC
GGGGCGCCGC TGCTGGAGCC GGTGATCGTC GATCCAGCCG GCGATCTGGC GCGCTACCGC
GCGCTCAGCC TGGAACTGCT GTCGTCAGGA GTGCGCCACG TGGTCGGCTG CTATACATCG
TCGAGCCGCA AGGAGGTGAT CCCGTGCTTC GAGAAGTGCG ATGGATTGCT ATGGTATCCA
TCGCACTATG AAGGGTTCGA GAGTTCGGAC AACGTCATCT ACACCGGTGC AGCGCCGAAC
CAGCACGTGT TGCCGCTGGT GGACTATCTC GTCGCGCGTG TCGGCAAGAC CGCGTTCTGT
ATCGGCTCCA ATTACATTTG GGCTTGGGAG AACAACCGAA TCTTCCGGGA AGCGCTGATG
GCGCGGGGCG GCAGCGTGAT CGCCGAACGC TATTTGCCGG TCGGCGACAC CGACGTCGAT
CGCGTGGTCG AAGCGATTGT CGACCAGCGG CCGGATTTCG TCTTCAACAA TCTGATCGGC
AGTAGCGCCT ATTCGTTCTT CCGCGCGCTG CGCCGCGCCT GTCGCGCCCG CGGCATCGAT
CAGGTCGCTA CGATCCCGGT CGCTTCCTGC ACGCTGTCGG AGCCGGAGCT CGCCGAAATC
GGCGAAGATG CAGTCGATGG CCATCTCTCC TCGAGCGTGT ACTTCTCCTC GGTCGGCGGC
GTGGCGAATG CCGTCTTCCG TCGCGCCTAT GCCGCGGCGT TTCCGCAGGG GCCGGCCTCG
TCGGCCGACG CCGAATCCTC CTATATCGCG GTCAAGCTGC TCGCGGCGGC GTTGCAGCAG
GCCGGAACCG ACGAGGCCCG CGCTGTGCGC GCCGCGGTGG CCAATCAACG GTTGGCTGCG
CCGCAGGGCG AGGTCCGTAT CGATCCGCAG ACCTATCATG CCTGGTTGAC GCCGCGGATC
GGCCGCTCGA CGGCCGACGG ACAGTTCGAC GTGCTGCTCG AAGCCCAGCA GCCGATTGCT
CCCGATCCCT ATCTCGTCCA GACCTCGCCG CGGTTCGCGA CCGCGATGCG ATCTCCGCTA
TTGAGGGTGG TGTAG
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| Protein sequence | MLRKTYRIGV MLSTTGSYGA VARSMLNGAT LAFQEIAAAG GAPLLEPVIV DPAGDLARYR
ALSLELLSSG VRHVVGCYTS SSRKEVIPCF EKCDGLLWYP SHYEGFESSD NVIYTGAAPN
QHVLPLVDYL VARVGKTAFC IGSNYIWAWE NNRIFREALM ARGGSVIAER YLPVGDTDVD
RVVEAIVDQR PDFVFNNLIG SSAYSFFRAL RRACRARGID QVATIPVASC TLSEPELAEI
GEDAVDGHLS SSVYFSSVGG VANAVFRRAY AAAFPQGPAS SADAESSYIA VKLLAAALQQ
AGTDEARAVR AAVANQRLAA PQGEVRIDPQ TYHAWLTPRI GRSTADGQFD VLLEAQQPIA
PDPYLVQTSP RFATAMRSPL LRVV
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