| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3019 |
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| Symbol | |
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| ID | 3973626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3315489 |
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| End bp | 3316361 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926130 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_532883 |
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| Protein GI | 90424513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03622] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.49585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA CGACGCTGGC CTTCTCTGCG CTGTTTCAAT TCGGGGACGC TTTCGCGTTC
CTGGTGCTGT CGGCCTGCGG GCTTGCGGTG ATCTTCGGCA TGATGGGCGT GATCAACCTC
GCGCATGGCG AGTTCATCAT GTGCGGGGCC TATGTCACGG CTGCCACCGT GCATGCGGGG
CTGCCGCTGC CGCTGGGGAT CGTCGCCGGG GCGCTGGTTT CGGCGCTGGT CGGCATGCTG
GTCGAGTTCG TCGTGGTGCG TCACCTCTAT GAGCGCCCGC TCGACACCAT CGTGGCGACC
TGGGGGATCA GCCTGATCGC GACGCAGGGC ACGCTGATCG CGATCGGATC GACGATGGGC
GGCGTCGGCA CGCCGTTCGG CTCGTTTCAG GTCGGGGCCT ACTCCTATTC GATCTACCGG
ATCGTGCTGT TCGCATCGGC GCTCGGCGTC TTGGGCGGGC TGTACGCCTT GTTCAATTGG
ACATCGTTCG GCGTCAAGGC GCGCGCCACC ATTCAGGTGC CGCACATGGC CAACGCGCTC
GGCGTCGATA CCCGTTGGAT CTACAGCTTG ACCTTCGCCT GCGGTGCGGG CCTCGCGGGC
CTCGCCGGCG GGCTTTACGC GCCGACCATG ACGCTGGTGC CGACGATGGG AGCCACCTTC
CTGATGGAGG CCTTCGTCAC CGTGGTGATC GGCGGCGCCG ACGTCTTCCT CGGCACAGCA
CCCGCAGCCG CAGTGCTCGC CGTGGTGAAA TCGGTGATGA CCTCCTGGCA GGGGCAGCTG
TTTGGCCAGA TCGGCTTGCT GATCGCCGTC ATCGTCGTGG TCCGCGTGCT GCCGAAGGGC
ATCTCCGGAT TTCTGTTGCG CGAACGGACA TGA
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| Protein sequence | MDITTLAFSA LFQFGDAFAF LVLSACGLAV IFGMMGVINL AHGEFIMCGA YVTAATVHAG
LPLPLGIVAG ALVSALVGML VEFVVVRHLY ERPLDTIVAT WGISLIATQG TLIAIGSTMG
GVGTPFGSFQ VGAYSYSIYR IVLFASALGV LGGLYALFNW TSFGVKARAT IQVPHMANAL
GVDTRWIYSL TFACGAGLAG LAGGLYAPTM TLVPTMGATF LMEAFVTVVI GGADVFLGTA
PAAAVLAVVK SVMTSWQGQL FGQIGLLIAV IVVVRVLPKG ISGFLLRERT
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