| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3008 |
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| Symbol | |
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| ID | 3973615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3302409 |
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| End bp | 3303620 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926119 |
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| Product | type II secretion system protein |
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| Protein accession | YP_532872 |
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| Protein GI | 90424502 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.314245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATT TCCGCTACCG CGCGCTGACC CAGACTGGCG AGATCGTCTC GGGGTCGATT
TGCGCGGCGA GTCTGGGAGA GGTGTCGCAA CGGATCGAGT ATCTCGGTCT GGTCGCCATC
GATATGGTCT TGGACAATGC GGCGAGCGGC TGGTCGTTGC AGCTGGGGTC GTTGTCGAAC
CCGCGCCCCG AGGACGTCAC GGTCTTGACG CGGGATCTCG CTCTGCTGAT CAAGGCGGGG
GCCCGGCTCA ACGATGCCCT CGAATTGTTG GCCAATGACA TGGACGTCGG CCGGCTGCGC
CCGGTGGTGC TGAAGATTAG AACGGCGATT CTTTCCGGCG AGAGTTTTGC CGAAGCGCTG
GAACGTCATC CGGCGCAGTT CCCAGCGATG TACGTTGCAT TGATCCGGGT CGGAGAGATG
TCCGGGACGC TCGACCGCAT CCTGGAGACG CTTGGCACCG AGCGTAATCG CGCCGAAGCG
CTGCGCCGGA AAGTGACCGA CGCGTTGCAG TATCCGGCCT TCGTGTTGCT GGCGGCCGGC
GGCGTGCTGA TCTTCTTTGT CTGTTTCGTG TTGCCGCAGT TTTCGTCGGT GCTGCGCGAC
TTCAACGCGA AACTCGATCC GGTCATGGAG ATGTTCATGG CGCTGTCGGA TCTGCTGCGC
GGCCACGGCA TCGAAGTTGC CGCAACCGCC GCTGGGATCA TCATCGGCGG CTGGCTGCTA
TGGCGCAGAC CCGGCGTTCG CGCCGGCACG GTCGCGCAAT TGGCGCGGCT GCCGGTGATT
TACTCGGTGG TCGAGTTTCA CCGCACCGCC TTGTTCTGCC GCAATCTCGG TATTCTGCTC
GGCAGCGGCG TGACGCTGAC CGCGACGCTG CGGATTCTGA CCGACATCAT GTCGGAGACC
GGAAACGTCC CGGTTTGGAC GGCGATGGCC GATCGGGTCC GCCACGGCGG CAAGCTCTGC
GATGCGCTCA CCAACGCAGC AATGCTACCG CCGGTGGCGG TGCGCATGCT TCGGCTGGGC
GAGGAAACCG GGCAACTGCC GACGCTCGCT ACCCGCGTCG CGGAATTCTA CGAGACCAAG
CTGCAGCGCC AGCTCGATCG CTTGGTCGGG GTCATCGGGC CGGCCGCCAT TGTCATGATC
AGCGTCGTGG TCGGCGGGCT GATTGTTTCG GTGATGACCG CATTGTTGTC GGTCACCCAG
GTTGTCGGAT GA
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| Protein sequence | MPNFRYRALT QTGEIVSGSI CAASLGEVSQ RIEYLGLVAI DMVLDNAASG WSLQLGSLSN
PRPEDVTVLT RDLALLIKAG ARLNDALELL ANDMDVGRLR PVVLKIRTAI LSGESFAEAL
ERHPAQFPAM YVALIRVGEM SGTLDRILET LGTERNRAEA LRRKVTDALQ YPAFVLLAAG
GVLIFFVCFV LPQFSSVLRD FNAKLDPVME MFMALSDLLR GHGIEVAATA AGIIIGGWLL
WRRPGVRAGT VAQLARLPVI YSVVEFHRTA LFCRNLGILL GSGVTLTATL RILTDIMSET
GNVPVWTAMA DRVRHGGKLC DALTNAAMLP PVAVRMLRLG EETGQLPTLA TRVAEFYETK
LQRQLDRLVG VIGPAAIVMI SVVVGGLIVS VMTALLSVTQ VVG
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