| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2994 |
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| Symbol | |
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| ID | 3973236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3277094 |
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| End bp | 3277645 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926105 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_532858 |
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| Protein GI | 90424488 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0287557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGGTG TTACCATCAA CTATTTGCGC GATCTGCTGC TCACGGATTA CCGCCAACTT
GATCGACAAC TCACCCGCCG CTTCGGCTCG GCGGACTTTG CTTCCGACGT GCTCCAGGAA
ACTTACCTTC GGCTCGAGGC AATGACCGAC ATGGTCGCGG TGCGAAGCCC GAAGGCCTAC
CTGCTCCGCA TCGCCCTCAA CATCGCCAAC GACCGGCTGC GGGCTGAGAG CCGCCGCTTG
ACGGTCGACG AGGCCGATTG CCTGTTGGAT ATCCCCGACG ACCGGCCCGA CGCAGCGCGG
GTGACCGAGG ATCGCTCCGA AATCATCCTG TTGCGGCGCG CCATTGCCGA ACTCCCCGAT
CGCCGACGAC ATGTGCTGCT GCTTTCGCGC GTCGAAGGGG TCGCCCATCG CGAAATCGCC
AAACGCCTCG GAGTCACTGT GCGAACCGTT GAAACCGATC TTAAACAAGC GGTTGCGCAT
TGCGCGCAGC GCCTCAAGCG CCCCCTCCCG CCCAAATGCG TGCTTCGCCG CTCGGATTCC
TCCTATATTT AG
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| Protein sequence | MSGVTINYLR DLLLTDYRQL DRQLTRRFGS ADFASDVLQE TYLRLEAMTD MVAVRSPKAY
LLRIALNIAN DRLRAESRRL TVDEADCLLD IPDDRPDAAR VTEDRSEIIL LRRAIAELPD
RRRHVLLLSR VEGVAHREIA KRLGVTVRTV ETDLKQAVAH CAQRLKRPLP PKCVLRRSDS
SYI
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