| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2992 |
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| Symbol | |
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| ID | 3973234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3272942 |
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| End bp | 3274909 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926103 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_532856 |
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| Protein GI | 90424486 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0423324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCC GTGTCCGAAA ATCCTTCCGC TGGAGGACCG TCAGCGCGCC TTTGATGCTT
GCGCTGGTGC TGTTCTGCGT GCTGTGGCCC GGTCAGGCTT CGGCGTGGTG GAACGATCAG
TGGAGCTTGC GCAAGAAGAT CACCATCGAT ACCGGCCCAT CCGGCGCCGG CATCAGCGAG
TCGATCGGGA CCACGCCGAT CCTGGTGCGA CTGCACGTCG GCAATTTCCG GTTTGGCGCG
GCCAAGGACG ACGGCGGCGA TCTGCGTTTC GTCGCCGCGG ACGACAAGAC CCCGCTGAAA
CACCATGTCG AGAAATTCGA CCCGCTGCTT GGCGAAGCGC TGGTGTGGGT CAGCGTCGCC
GATCTGAAGC CCGGGACCAA GAACGAGATC TGGCTGTATT ATGGAAATCA GAAGGCGCCG
GCGGCGGTCG ATGCCAAGGG CAGCTATGAC CCGGATGCGC TGCTGGTCTA TCATTTCGCC
GAGCGCGGCA CGCCGGCCCA GGACTCCACG GCCTGGGCGA ACGCCGCGCA GAGCCTTGTG
CCGGGCGCCG ACGGCGCCAT CATCGGCCAG GGCGCGAGGC TGGATGGACA GACCCCGTTG
ATGTTGCCTG GCGCGCCGGC ATTGGCCGTC GCCGAAGGCG GAGAGCTGAG CTGGTCGGTC
TGGCTGAAAA TGGCCGCGCC GCAGCCGCGG GCGGTGCTGT TCGCCCGGCA TGACGGAGCC
AACGGACTGA TCATCGGTCT CGACAACGGC GTGCCGTTCG TCGAGGTGAC GAACGCAGGG
AGCGTCCAAC GCAGCGGCGA GGGGGCGGCG ATCGCGTCGT CGACGTGGCA CCATCTCGCC
GTAACCGCCA AGTCCGGCCA GATCGCGCTT TACCTCGACG GCAATCCGTT CTCGACGCTG
GCCGCGAGTT TGCCGACGCT GACTGGACCG GCTGCGGTCG GGCGGGATAC CCTCGCGACG
GTCGCGGAGC CGGCTGCCAG CGCGCCGCTG CCTGACGCAT CGGCAACCGA TGCTGCGGCG
GCTGCCGCAG ATCCTGCCGC TGCCCCCGCT GCAGCCGCCA CGGTCGGCTT CGTCGGCGAT
ATCGACGAAC TGCAGATTGC CAAAACGGCG CGCCCCGCCG GCTTCATCAA ATTGGCGGCG
ATCGGGCAGG GGCCCGACCA GGCGAAATTG ATTTCGTTCA GCGTCGACGA GGAAACCGCG
AGCTGGATCA GCGGCTATTT CGCCGTGATC CTGAAATCGG TAACGCTCGA CGGATGGGTG
GTGATCGGAA TCCTGGCGAT CATGATGGTG ATCAGCTGGA TCGTGATGAT CGACCGGGTA
TCGTATCTGA ACCGGATCGC GAAGGGGAAC AGGCTGTTTC TGAAGCACTT TCGCGAGTCG
GCGACCGACC TCGAAGGGCT GCTGCAGTTC GACCGCGAGG AGACCGACGC GAGCATCGCC
GGAAAGAGCG ATACGCAGGA TCACAAGGCC ATCCATTCCG CGCCGCTTCA TCGTCTGTTC
CATATTGGCG TCCAGGAAAT CCGCCGGCGG TTCTCCGCCA ATGGCGGCGG TCCGCGGCTG
CTTTCGCCCC AAGCGATCCA GTCGATCCGT GCGGTGCTCG ACAGCGGCTT CATTCACGAG
ACGCAGCGTC TCAACAAGAT GATGGTGATG CTGACGATCG CGATTTCTGG CGGACCGTTC
CTCGGGCTGC TCGGCACCGT GGTCGGCGTG ATGATCACCT TCGCGGCGAT CGCCGCCTCC
GGCGACGTCA ACGTCAACGC GATTGCGCCA GGCATCGCCG CCGCGCTGGT TGCGACCGTG
GCCGGCCTCG CGGTCGCGAT CCCGGCGCTG TTCGGCTACA ACTACCTGAC TATCCGCATC
AAGGACTCCA CCAACGAGAT GCAGGTCTTC GTCGACGAAC TGGTGACGAA GATGGCGGAG
TCCTATCACC AGCAGCCCGA TAGACCCCGA CGTCAGGCCG CGGAGTAG
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| Protein sequence | MTVRVRKSFR WRTVSAPLML ALVLFCVLWP GQASAWWNDQ WSLRKKITID TGPSGAGISE
SIGTTPILVR LHVGNFRFGA AKDDGGDLRF VAADDKTPLK HHVEKFDPLL GEALVWVSVA
DLKPGTKNEI WLYYGNQKAP AAVDAKGSYD PDALLVYHFA ERGTPAQDST AWANAAQSLV
PGADGAIIGQ GARLDGQTPL MLPGAPALAV AEGGELSWSV WLKMAAPQPR AVLFARHDGA
NGLIIGLDNG VPFVEVTNAG SVQRSGEGAA IASSTWHHLA VTAKSGQIAL YLDGNPFSTL
AASLPTLTGP AAVGRDTLAT VAEPAASAPL PDASATDAAA AAADPAAAPA AAATVGFVGD
IDELQIAKTA RPAGFIKLAA IGQGPDQAKL ISFSVDEETA SWISGYFAVI LKSVTLDGWV
VIGILAIMMV ISWIVMIDRV SYLNRIAKGN RLFLKHFRES ATDLEGLLQF DREETDASIA
GKSDTQDHKA IHSAPLHRLF HIGVQEIRRR FSANGGGPRL LSPQAIQSIR AVLDSGFIHE
TQRLNKMMVM LTIAISGGPF LGLLGTVVGV MITFAAIAAS GDVNVNAIAP GIAAALVATV
AGLAVAIPAL FGYNYLTIRI KDSTNEMQVF VDELVTKMAE SYHQQPDRPR RQAAE
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