| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2959 |
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| Symbol | |
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| ID | 3969958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3235998 |
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| End bp | 3238490 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926070 |
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| Product | putative outer membrane protein precursor |
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| Protein accession | YP_532823 |
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| Protein GI | 90424453 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGC TAGGCAAAGC CGCCGGGGCA GGCAACGGCG AGCGTCGCCA CGACATACGG
CACGTCGACA TCAAAGGGGG CTGGGAAATG ATGATCAAGC AAAGATTGCT GCCGATGTCC
GCCGCACTGG CGATGGTGAC CGCGGCGCCG TTGAATGCGA ACGCAGCGGA CCCTCCGGCC
GCTGTGCCGG ATTTCGAAGC AGCGCATGAG GGCTATGACT TTTCCGGCGA GTTCGACGTC
GGTGGGCGTG CGTTCATCAA ACGCCCGCCG AAATCGTCGG CGCATTATGT CACGCCGGCC
AGCCCCACTG CGCCGGCCAA TCGCGATCCC AATAACCGCT CGAAGTTTGA GGAGTATGGC
GCCATCCCGC CGGGGCTGTT TGCCGAGTAC CTACGGATGA CGCTGCAGAG CAAGGACGGC
CTCTACTTCG GCGAACTGCG CGCCGACAAC ATCGGCAACA ACAATCAGCG CTACATCGTC
GACGCCTCCA AGGCCGGAGA GCACTACCTG ACCGTGGTGT GGGATCAGAT CCCGCATCTC
TACAACACCA GCGCGCTGAG CATCTGGAAC GGCGTCGGCA CCAACAACCT GACCACCACC
GTCGCGATCC CCGGCAGCAC ACTCGCCCCC GTCGGGGGAG TTTCCACCCC GGCGCAGCGC
GCAGCCGTGA CCAATGCGCT GGCCGGGAAG TTCAACCCGC TCGACGTCGC AATCCAACGC
GACAAGGCCG CTGTGGCCTA TCGCTGGACG CCCGATCCGC ACTGGGACGT CAAGGCGAGC
TACTCTCACG AGAAACGCGA AGGCATTCAG ACCTCGGGCG TCGCGATCGG CGGCCTCGGC
TCGCTGCAGC AGTTGCAGGC GCCGCGTCCG ATCGACGACA CCACCCAAAT CGGCAAGGTG
ACCGGGCAAT ATTTCGGCCC GACGCCATGG GGCGGACATT TCAACGTCCA GGTCGGCGGC
GGCGTGTCCT TGTTCGAGAA TAACTACAGC TCCTTCACGG TGCAAAACCC GTTCGCCGAT
ACGGTGACGC CGTCGATCTA TTCGCCCGCC GCCCGCATCA GCCTGATGCC GAGCAACCAG
GCTTACAACA CCACGGTGAC CAGCGGCGTC GATCTGCCGT TCAAGACCCG TTGGAACAGC
ACGATCCAAT ACACCACGAT GCGGCAGAAC GAACAGTTCA TGCCATTCAC CGTCAATCCG
AACATTGCGA CGTTCTTGCT GCCGGCGTCG AGTTTGAACG GCGAGGTCAA TACGTTTCTC
TACAACACCA ACGCCACGAC GCAGTGGACG CCGGAATTCC GTTCGACGTT TCGCTACAGG
ATCTACGACA ACGCCAACCA GACGCCCGAA CTGCTGATGC CGTCCTATGT TGTCGAAGAC
TCGTCGGCCA CCGGCATCGC GGCCGGCGTT CCCCGACGCG CGCTGGCGAT GTCCTACACC
AAGCAATACG CCAGCGAGGA TTTTCAGTGG CGTCCCGCCA AATGGGTCAC GCTCGGCAGT
AGCTTCGGCT GGGAACAGTG GGACCGCACC CGCCGCGACG CCAATGTCAC CAACGAATTC
ATCGGCCGCG GCACCGCGGA TTTCAAGATC TACGACGTGG CGACGCTGCG ATCCAGCCTG
CAATACGCCG AGCGGCGCTA TGACAATTAC GACGGCCGCG CGATGTCGCT GGACACCTAC
TACGCCGCGT CCAACACCGG GACGAATTTC CTGATCCGCA AGTTCGATAT GGCCAATCGC
AATCAGACCA AGGCCAATGT GTTCCTCGAC ATTTCGGGCC CCAGCGGCAG CATCTTCAGA
GATTTCGTGA TCTCGCCCAC CGCTGGCCTG CGCTTCGAAG ACTATCCGGA CGATCCGGCG
TTCTTCGGGC TGCGGAAGAG CGACAGCTGG AACGGCGGCG TCGACGTCAC CTACGTGTTC
AAGCCGGGAA CGGCGCTGCA GGCGTCGTAT CTTTACGAGA CCTATGATCG CTTCCAGGTC
GGGAGCGGCA CGATCACCAA TCCGGTGACC AACGCCACGT TCCCGGCGGT CCCCGACGCG
TTCACGAGCA ACACCCACGA GAAGGTGCAT ACCATCCTGG TCGCGGCCAA TGCCGAGATC
ATTCCGGGAT CGCTGGATTT CAAACTCGGC TATTCGCTGT CGCTCGGCAA GGAAGATTGG
GATTACGGCG CCTTCGCCAA CTATCCGCTG CAGGGTAATG GCGTGGGTTA CTCGCCATTC
CCCACCGTCC GCACCAATGT GCAGCGTCTC GACGCCTCGC TCAAACACAC GGTCGATCCG
TCGATCGTCA CCCAGCTCGG TTGGACCGGC GAGGTGTACT TGAAGGCGCG CTATATCTGG
GAGCGTAGCA GCGTCGAGAA TTGGCAACAG GATCTGATGT CGCCATACCT GTACCTGGTG
GACCAGACGC TGGCGCGGCT GATCGACATG GGAGCCACAA ATCCGAATTA CAACGCGCAG
TATTTCCAAT TGTCGCTCAA CGCCAAGTGG TGA
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| Protein sequence | MAPLGKAAGA GNGERRHDIR HVDIKGGWEM MIKQRLLPMS AALAMVTAAP LNANAADPPA
AVPDFEAAHE GYDFSGEFDV GGRAFIKRPP KSSAHYVTPA SPTAPANRDP NNRSKFEEYG
AIPPGLFAEY LRMTLQSKDG LYFGELRADN IGNNNQRYIV DASKAGEHYL TVVWDQIPHL
YNTSALSIWN GVGTNNLTTT VAIPGSTLAP VGGVSTPAQR AAVTNALAGK FNPLDVAIQR
DKAAVAYRWT PDPHWDVKAS YSHEKREGIQ TSGVAIGGLG SLQQLQAPRP IDDTTQIGKV
TGQYFGPTPW GGHFNVQVGG GVSLFENNYS SFTVQNPFAD TVTPSIYSPA ARISLMPSNQ
AYNTTVTSGV DLPFKTRWNS TIQYTTMRQN EQFMPFTVNP NIATFLLPAS SLNGEVNTFL
YNTNATTQWT PEFRSTFRYR IYDNANQTPE LLMPSYVVED SSATGIAAGV PRRALAMSYT
KQYASEDFQW RPAKWVTLGS SFGWEQWDRT RRDANVTNEF IGRGTADFKI YDVATLRSSL
QYAERRYDNY DGRAMSLDTY YAASNTGTNF LIRKFDMANR NQTKANVFLD ISGPSGSIFR
DFVISPTAGL RFEDYPDDPA FFGLRKSDSW NGGVDVTYVF KPGTALQASY LYETYDRFQV
GSGTITNPVT NATFPAVPDA FTSNTHEKVH TILVAANAEI IPGSLDFKLG YSLSLGKEDW
DYGAFANYPL QGNGVGYSPF PTVRTNVQRL DASLKHTVDP SIVTQLGWTG EVYLKARYIW
ERSSVENWQQ DLMSPYLYLV DQTLARLIDM GATNPNYNAQ YFQLSLNAKW
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