| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2861 |
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| Symbol | |
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| ID | 3970050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3115457 |
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| End bp | 3116875 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925973 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_532728 |
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| Protein GI | 90424358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.750031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAC CACAGCATCC GTCGGCCCGC GCGGCCCTTC ATCGTTCAGG CGTTCGGCTG
ACCGCGTGGC TGGTCGCCGC GGCGCTGGCG TTGGCGCCGC AGCCATCGCT GGCCCAGCAG
GGCAACAACG GCCCAAGGCT GTTGCGCGAC ACCGAGATCG AGCAGCTGCT GCGCGACTAC
ACCCGGCCGA TCCTGCGCAC CGCGGGGCTG GAAAAGCAGA ACATCCAGGT CGCGATCATC
AACGACCCGA CCTTCAACGC CTTCGTCGCC GACGGCCGGC GGATCTTCGT CAATTACGGC
GCGCTGATGC AGTCGCAAAC CCCGAACCAA CTGATCGGCG TGCTGGCGCA TGAAACCGGC
CATCTCGCCG GCGGCCATCT GTCGAAGCTG CGCGAACAAT TGGCGCAGGC GCAAACCCAG
ATGATCGTGG CGATGATGCT CGGCGTCGGC GCCATGGTGG CCGGCGCCAA GAGCGGCAGC
GAAGGCGCCG CCGGCAATAT CGGCATGGCC GCGTTGAGCG CGCCGCAGGA GATGATCCGC
CGCAACCTGT TGTCGTACCA GCGCCAGCAG GAGGAAAACG CCGACCGCGC CGGGGTCAAA
TTCCTGACCG CCACCGGGCA ATCGCCGAAG GGCATGTACG AGACCTTCAA GCGCTTCACC
GACGACAGCC TGTTCGCGGC GCGCGGCGCC GACCCTTACG CGCAATCGCA TCCGATGCCC
GCGGAGCGGG TCCGCGCGCT GGAAGACCTG GCGCGCTCCA GCCCCTATTG GGACAAGAAG
GACGACGCCG CGCTGCAATT GCGCCACGAC ATGATGCGCG CCAAGACCTC CGGCTTCATG
GAGAAGGCCG ACACCGTGTA TCGGCGCTAT CCGCCGTCCA ACGACACCCT GCCGGCGCGC
TACGCCCGCG CCATCGCCAC CTATCTGCAC GGCGACCTGC GCTCGGCGCT GAGCCAAATC
GACGGCCTGA TCCAGCAGCA GCCGGCCAAT CCGTATTTCT ACGAGCTGCG CGGCCAGGCG
CTGCTGGAAG GCGGCCGGCC GGCGGAAGCG GTGGCGCCGC TGCGCAAGGC GGTGGCGATG
ACGAACGGTG CGCCGTTGAT CGCGATGCTG CTCGGCCAGG CGCTGGTCGC CTCCGACAAC
AAGGCCACCA CCGACGAGGC GATCGGCATC CTGCGCGTGG CGCTGGCGCG CGAAACCGAG
GCGCCGCTCG GCTATTCGCA GCTGGCGATG GCCTATGGCC GCAAGGGCGA CTACGCCCAG
GCCGACCTCG CCGCCGCGCA GGCCGCGTTC CTGCGCGGCG ACGGCAAGAC TGCGCGCGAA
CTCGCCTCCC GCGCCAAGAC CCGCTTCGCG GTCGGCTCGC CCGGCTGGGT CAAGGCCGAC
GACATCGTCG CCACCAAACC GATGCCGGGA CAGAAGTAA
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| Protein sequence | MIKPQHPSAR AALHRSGVRL TAWLVAAALA LAPQPSLAQQ GNNGPRLLRD TEIEQLLRDY
TRPILRTAGL EKQNIQVAII NDPTFNAFVA DGRRIFVNYG ALMQSQTPNQ LIGVLAHETG
HLAGGHLSKL REQLAQAQTQ MIVAMMLGVG AMVAGAKSGS EGAAGNIGMA ALSAPQEMIR
RNLLSYQRQQ EENADRAGVK FLTATGQSPK GMYETFKRFT DDSLFAARGA DPYAQSHPMP
AERVRALEDL ARSSPYWDKK DDAALQLRHD MMRAKTSGFM EKADTVYRRY PPSNDTLPAR
YARAIATYLH GDLRSALSQI DGLIQQQPAN PYFYELRGQA LLEGGRPAEA VAPLRKAVAM
TNGAPLIAML LGQALVASDN KATTDEAIGI LRVALARETE APLGYSQLAM AYGRKGDYAQ
ADLAAAQAAF LRGDGKTARE LASRAKTRFA VGSPGWVKAD DIVATKPMPG QK
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