| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2814 |
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| Symbol | |
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| ID | 3970081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3055888 |
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| End bp | 3056616 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925926 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_532681 |
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| Protein GI | 90424311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0540446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA AATCTGATAC TCCCGCGGTC AAGGCGCTGT TGTTCGACAT CTTCGGCACC
GTGGTGGATT GGCGCGGCAG CCTGATCGCC GACCTCACGC AATGGTCGGC CAAGCGCGGC
GTCAGCGGCG ACTGGACAGC ATTGGTCGAC GCCTGGCGGC AGGCCTATGT ACCGTCGATG
AACGAGGTGC GCAAAAATCC GGGGCGCGGC TTCATCATCC TCGACACGCT GCACCGGCAG
TCGCTGGAGC GGCTGGTGGT GGAGCTCGGC ATCAACGGCC TCACCGACGA CGACCTGCAT
GACATGACGA TGGGCTGGCG GCGGCTGAAG CCGTGGCCGG ACGTCGTCGC CGGACTGACC
CGGCTGAAGC GCGACTACAT CCTGTCGCCG CTGTCGAACG GCAACGTCGC GCTGCTGACC
AATCTTGCGA AGAGCGCCGG GCTGCCGTTC GACCTGATCA TCGGCGGCGA CATCTCCGGC
CACTACAAGC CGGATACTGA GACCTATCTC GGCGCCGCCA AGCTGTTGTG CCTGCGGCCC
GACGAGGTGA TGCTGGTCGC CGCACACAAT AACGATCTCG CCGCGGCGCA GGCGCTGGGT
CTGAAGACCG GCTTCGTGCC GCGCGTCACC GAATACGGCC CGCTGCAGGT GCGCGATTTC
GAGCCGGACC GCGCCTGGGA CATCGTGGCG CGCGATTTCG GCGACTTGGC CGAGCGACTG
GGCTGCTGA
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| Protein sequence | MTTKSDTPAV KALLFDIFGT VVDWRGSLIA DLTQWSAKRG VSGDWTALVD AWRQAYVPSM
NEVRKNPGRG FIILDTLHRQ SLERLVVELG INGLTDDDLH DMTMGWRRLK PWPDVVAGLT
RLKRDYILSP LSNGNVALLT NLAKSAGLPF DLIIGGDISG HYKPDTETYL GAAKLLCLRP
DEVMLVAAHN NDLAAAQALG LKTGFVPRVT EYGPLQVRDF EPDRAWDIVA RDFGDLAERL
GC
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