Gene RPC_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2749 
Symbol 
ID3970166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2988315 
End bp2988971 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID637925859 
Productnitrile hydratase 
Protein accessionYP_532616 
Protein GI90424246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.5824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCG CACACGACAT GGGCGGCCTG AAAGGCTTCG GTGCGGTCAA GCCGGAGCCG 
AACGAACCGC TGTTTCATGC GGCGTGGGAG CGCCGCGCCT TCGCGCTGAC GCTGGCGATG
GCAAGGCCGG GCGGCTGGAC CATCGACATG GCGCGCTACG CCCGCGAGAA CCGGTCGCCG
CGGGATTATC TCAGCAAGAG TTACTACGAG ATCTGGTTGG CTGGGCTGGA GCAACTGATG
AGCGAGCGCG GCCTGGTCAC GGCCGACGAG ATCGCCGCCG GCCGGCCGCT GCATCCGGCA
AAAGCAGTGC CGGTGCTGCG GGCCGACGAG GTGGCGGCCA TGCTGCAACG CGGCGCGCCG
ACGCTCCGCG ACGCGCCGCG CCCTGCCCGG TTCGCGATCG GCGCGCGGGT GCGGGCGAAG
ACCATCGCGA CGGCGGGTCA TACGCGGCTG CCGCGTTACG TCCGCGGCCA TCTCGGTGTG
ATCTGGTGCG TTCACGGCTG TCACGTGTTC GCCGACGCCA ATGCCCGCGG CATCGAAGAC
CCGCAATGGC TCTACACCGT CTCTTTCGAC GGCTCGGAAT TGTGGGGCGC CGAGGCCGAG
CCGGACACCA AGATTTCCGT CGAGGCCTGG GAATCCTATC TGGAGCCGGC GTCATGA
 
Protein sequence
MDGAHDMGGL KGFGAVKPEP NEPLFHAAWE RRAFALTLAM ARPGGWTIDM ARYARENRSP 
RDYLSKSYYE IWLAGLEQLM SERGLVTADE IAAGRPLHPA KAVPVLRADE VAAMLQRGAP
TLRDAPRPAR FAIGARVRAK TIATAGHTRL PRYVRGHLGV IWCVHGCHVF ADANARGIED
PQWLYTVSFD GSELWGAEAE PDTKISVEAW ESYLEPAS