| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2715 |
|---|
| Symbol | |
|---|
| ID | 3970307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2944944 |
|---|
| End bp | 2946266 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637925826 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_532583 |
|---|
| Protein GI | 90424213 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCA TTCGGACAGA CATCGATCAG ATTGAGAAAG TGACAATGCG CAGGGTCATC
CTGCGTCTCG TGCCCTTCCT GATGATCTGC TACTTTTTCG CACTGCTCGA CCGCGTGAAT
GTCGGCTTTG CGGCATTGCA GATGAACAAG GATCTCGGGC TGACACCCGC GATGTTCGGC
TTTGCCGCCA GCCTGTTTTT CGTCTCGTAC TTCCTCGTCG AAGTGCCGAG CAACCTCGCC
CTACAGAAGT TCGGGGCCCG GCGCTGGATC GCGCGCATCA TGATCACCTG GGGATTGGTG
ACGGCGCTCA TGGCCTTTGT CATCGGGCCG TACTCGCTCT ACACGATGCG CTTCATCCTC
GGCGCCGCCG AGGCCGGGTT TTTTCCCGGC GCCATCCTCT ATCTGACCTA CTGGCTGCCG
TCGCAGTACC GGGCGCGCAT CCTGGCGACG TTCACGGTCT CGATTCCGCT CGCCACGTTC
CTGGGGTCGC CGCTTTCGGT CGGCCTGCTG GAGCTTGACG GAATCCTTGG CCTGCGCGGC
TGGCAGTGGC TGTTCATCCT GGAAGGGATC CCCACCGTCC TGCTCGGTGT CGTATGCCTG
TTCGTTCTGA CCGACAAGCC GGCGCAGGCG TCCTGGCTGA CCGCGGAGCA GCGCAACTGG
CTGGTCGGAC GCATGGAGTC GGAAGCGGCT GCCCGCAAGC CGGTCGGGCA TCTCTCGCTC
TGGCAGCTTG CCACCAACAA GTATTTTCTT GTCATGGGCC TGGTTTGCTC CGGCGCCTCC
GCCACCGGCA GTGTCCTGTC GGTCTGGCAA CCGCAGCTGC TGAAGTCGTT CGGCCTGTCG
AATCTGCAGA CCGGCTTCGT CAATGCAATT CCCTACGGTA TCGCAACCCT GCTGATGGTC
CTGTGGGGAC GCCATTCGGA CAAGTCGGGT GAGCGCCGCT GGCATACGGC CATCCCGCTG
TTGCTTGCCG CGTGTGGCTT TACAGCATTG GGGATGACCG GAACTGCGGT CGTGCCGACG
GTCATGATGG TGACGTGCTG TCTGGTCGGC GCCTATGCTT TCAAGGGGCC ATTCTGGGCG
CTTTCGGCGA GCTGGCTTTC ACCAGGCACC CTGGCTGCCG GACTCGCCGG AATCAACGCG
ATTTCAAACT TGATTGGTGG TGGACTGATG ATCAACGTGG TTGGAATTGT CAAAGATCGA
ACCGGCAGTT TCGTACTCGG GATGTTGCCG GTGGCGCTAC TTTGTGCCGT GGCCGCGGTT
TGCGCCCTTC TGCTTGGGCG CAACGCCGAG CGCGCGGCCG CAGTGGCGGC GGTCAAATCA
TGA
|
|---|
| Protein sequence | MTTIRTDIDQ IEKVTMRRVI LRLVPFLMIC YFFALLDRVN VGFAALQMNK DLGLTPAMFG
FAASLFFVSY FLVEVPSNLA LQKFGARRWI ARIMITWGLV TALMAFVIGP YSLYTMRFIL
GAAEAGFFPG AILYLTYWLP SQYRARILAT FTVSIPLATF LGSPLSVGLL ELDGILGLRG
WQWLFILEGI PTVLLGVVCL FVLTDKPAQA SWLTAEQRNW LVGRMESEAA ARKPVGHLSL
WQLATNKYFL VMGLVCSGAS ATGSVLSVWQ PQLLKSFGLS NLQTGFVNAI PYGIATLLMV
LWGRHSDKSG ERRWHTAIPL LLAACGFTAL GMTGTAVVPT VMMVTCCLVG AYAFKGPFWA
LSASWLSPGT LAAGLAGINA ISNLIGGGLM INVVGIVKDR TGSFVLGMLP VALLCAVAAV
CALLLGRNAE RAAAVAAVKS
|
|---|
| |