Gene RPC_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2707 
Symbol 
ID3970299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2934850 
End bp2935662 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID637925818 
Productputative hydrolase 
Protein accessionYP_532575 
Protein GI90424205 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA CCCTGACGAT CCTCGGCTGC GGATCGTCCG CCGGGGTGCC ACGACCGGCA 
TTGGGCTGGG GCGCCTGCGA TCCGACCAAT CCGCTCAATC GCCGCCGCCG CTGCTCGCTG
ATGGCCGAGT TAGTATCGGG GCAGGGCACC ACGCGGGTGG TGATCGACAC CTCGCCGGAT
CTGCGCGAGC AACTGATCGA CGCCGCCGTC GATCACATCG ACGCGGTGTT TCTCACCCAT
GAGCACGCCG ACCAGACCCA CGGCATCGAC GATCTGCGCT CGGTGGTGAT GGCGCAACGC
CGCCGCATTC CTGTCTATCT CAACAAGGTC ACCGCGGCGC ATATCCTGCT GCGGTTCACC
TATTGCTTCG AACAGGCGCC GGAAAGCAAC TATCCGGCGA TCCTGGAAGC GCACGACGTG
GAGGCCGGCG AAAGCCGCAC CATCGACGGC CCGGGCGGCG CGCTGACGCT GACGGCGTTC
CTGGTGCAGC ACGGTAGCAT TCCGGCGCTG GGCTATCGGA TCGGCAATGC CGCTTACACC
CCCGACGTCA ACGACATCCC GGAGCAAAGC TGGCCGCTGC TCGAAGGACT CGATCTGTGG
ATCATCGACG GGCTGCGCTT CAAGCACCAC GGCAGCCACT TCAACGTCGA GGCGGCGCTG
AGCTGGATCG CGCGCTTCAA GCCGAAGCGC GCGGTGATCA CCAATATGAG CGCCGACGTC
GACTACGAGG TGCTGCGTGG ACAACTGCCG CCGCACGTCG TTCCGGCGAT CGACGGCATG
CAGCTCACGC TCGATGCTGT CGCGACGTCG TAG
 
Protein sequence
MTLTLTILGC GSSAGVPRPA LGWGACDPTN PLNRRRRCSL MAELVSGQGT TRVVIDTSPD 
LREQLIDAAV DHIDAVFLTH EHADQTHGID DLRSVVMAQR RRIPVYLNKV TAAHILLRFT
YCFEQAPESN YPAILEAHDV EAGESRTIDG PGGALTLTAF LVQHGSIPAL GYRIGNAAYT
PDVNDIPEQS WPLLEGLDLW IIDGLRFKHH GSHFNVEAAL SWIARFKPKR AVITNMSADV
DYEVLRGQLP PHVVPAIDGM QLTLDAVATS