Gene RPC_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2668 
Symbol 
ID3970470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2898791 
End bp2900134 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content55% 
IMG OID637925779 
Producthypothetical protein 
Protein accessionYP_532537 
Protein GI90424167 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0826556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.985407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGG ATTATGTTTT TATCGGTGCA GGTCCGGCCT CATTGATTGC CGCAGGTCTG 
CTTTCGAAAA GCCAGCCGGG GGCGTGTATC CTAATATTGG AGGCAGGCGG CACGCTAAAG
CATCGAGGAT GTCCAGGAAT GCGGCGTCGC ACCTGCACAG ATTGCAGCAA GAGCGGGTGC
CGGGTGACGA TGGGCGTCGG CGGCTCAAGC GCTGGATTCG GGAACAAGAT GTGCCGTTTT
CCGGCCAGTT CGGAGACATT GTCCTTAGTT CCGCAGGAAG TGCGTTTGCA GGTGGAGGAT
ATCATAGCTC AACTGTTGGG CCGCGATCCC GGGCCGCCCG AGGTGTCGGA GTTTCCTGTT
GGGACAGTTC GTCGCAAATT CTACTCAGCC GATGTGTTGT TCCGATCGGA GTATGGGGCT
CTTATCGCCA AGTTGTTGGC CGAGCTATCC CATTCTGTTG AATTGCGCTC GGATGCGGCA
GTTGCGTCCG TTCAAAAAGG GGCTGAGGGC TTTGAACTTC AACTCGCCTC AGGGGAAAAG
GTCAAAACGT CAAAGCTGGT ATTGGGAACA GGGCGATCGG GGCACAAATT TATCCGACGG
ACGCTTGATT CTCTTGGCGT GTCATATGTC GAGGCGGAGA CCGATGTGGG AATTCGACTG
GAAGCACGCA CCGGCTTATT TAGCGAATCT TTCTTCTATC AAAACGATCC AAAGTTTAAA
GTCGATCACG GGGAATTGGG AACTTCCCGA ACATTCTGCG CCTGTCGGGG CGGACACATA
GTGCCAGTAA AGTTTGGGAA TGGCTTCTTC GCCGACGGGG CGTTTGTGAG TGGTCTCAGT
GACGTTACGA ATGTTGCTCT GATGGTTCGA TCATCTCAAC TGCTAACCTC AGAGCAACTC
GACGAGTGGT GCCGGTTTGT GAACGTTCGT TCTGGGCAGA GCCTTCTCCT CGGCGAGGTC
AGCGCTGAAG GCGGTCCCTC CGCGGCGACT ATACTTGCGA GCGTTCCCGT TTGGCCATCC
GATCGGCACA AATCGTTGAT GGCGGAACTC TTGGACGCGG TAGTCGCCGG AAAGCAGGTG
GACATGTTCG GAACATCAAT TCCCGGAGAA GCTGTAAAGA TTTATGGCCC AGCGGTGGAT
CGTTATTGGC CCTTGCCTAG TCTATCCACA GGTTTTCAGA CCAATGTCGA AGGGCTGTCC
ATTATAGGGG ATGCTGCGGG GCTATCCAGG GGTATCGTAC AGGCTCTGGC GTCCGGGGTC
GGTTGGGCCT TGGTAGAATC AGTCGCAACT GGCATGCTTA TTGATGAAGT GTTGACACAC
CCCAATTCAT CGAAAGCGGC TTGA
 
Protein sequence
MNWDYVFIGA GPASLIAAGL LSKSQPGACI LILEAGGTLK HRGCPGMRRR TCTDCSKSGC 
RVTMGVGGSS AGFGNKMCRF PASSETLSLV PQEVRLQVED IIAQLLGRDP GPPEVSEFPV
GTVRRKFYSA DVLFRSEYGA LIAKLLAELS HSVELRSDAA VASVQKGAEG FELQLASGEK
VKTSKLVLGT GRSGHKFIRR TLDSLGVSYV EAETDVGIRL EARTGLFSES FFYQNDPKFK
VDHGELGTSR TFCACRGGHI VPVKFGNGFF ADGAFVSGLS DVTNVALMVR SSQLLTSEQL
DEWCRFVNVR SGQSLLLGEV SAEGGPSAAT ILASVPVWPS DRHKSLMAEL LDAVVAGKQV
DMFGTSIPGE AVKIYGPAVD RYWPLPSLST GFQTNVEGLS IIGDAAGLSR GIVQALASGV
GWALVESVAT GMLIDEVLTH PNSSKAA