| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2643 |
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| Symbol | recO |
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| ID | 3973052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2873283 |
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| End bp | 2874047 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925754 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_532512 |
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| Protein GI | 90424142 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0111364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.705517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATGGA CCGATGAAGG CATCGTGCTG GGGGTGCGGC GGCATGGCGA GAGTAGCGCC
ATCGTCGAAT TGTTGACCCG CGGCCACGGC CGCCATCTCG GCCTGGTGCG CGGCGGCGCC
GGCTCCAAGC TGCGGCCGCT GCTGCAGCCC GGCAACAGCG TGAGCGCGGT GTGGCGGGCG
CGGCTCGACG AACATCTCGG CTATTACGTG CTGGAGGGCA CGCGGATGCG CGCGGCGATG
CTGCTGGCGT CGAGCCACGC GGTTTATGGC GTGACCCATC TGGCGTCGTT GGCGCGGCTG
TTGCCAGAGC GCGACCCGCA GCCGGAGATC TATGAGCGGC TGGAGCGCAC GCTGGACGAC
TTCGACGACG TCGGCGAGGC CGCGGTGCAT GTGATCCGCT TCGAACTGAC GATGCTGGCC
GAACTCGGCT TCGGGCTCGA TCTGGCCAAT TGCGCAGCGA CCGGGGTGAC CTCCGACCTG
ATCTATGTGT CGCCGAAATC CGGCGGCGCG GTGTCGCGGG CCGCCGGCGA GCCGTGGCGC
GACAAGCTGC TGCGGCTGCC GCCGTTCCTG CGCGAGGGCA GCGCGCAACG CAACGACTGG
TCCGACCAGG ACCTGCAGGA CGGCTTCCTT TTGACCGGCC GGTTCCTGCT GCGCAACGTG
CTGGAGCCGC GCGGCCAGGG CCATTCCGAC GCCCGCGACG GATTTATCAA CGCGGTTGTG
CGGCTGCGGA CCCGGGAACT GGCGGAAACC GCGCCGCCGA AATAG
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| Protein sequence | MEWTDEGIVL GVRRHGESSA IVELLTRGHG RHLGLVRGGA GSKLRPLLQP GNSVSAVWRA
RLDEHLGYYV LEGTRMRAAM LLASSHAVYG VTHLASLARL LPERDPQPEI YERLERTLDD
FDDVGEAAVH VIRFELTMLA ELGFGLDLAN CAATGVTSDL IYVSPKSGGA VSRAAGEPWR
DKLLRLPPFL REGSAQRNDW SDQDLQDGFL LTGRFLLRNV LEPRGQGHSD ARDGFINAVV
RLRTRELAET APPK
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