| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2528 |
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| Symbol | |
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| ID | 3970994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2740978 |
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| End bp | 2741529 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637925636 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_532398 |
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| Protein GI | 90424028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.146735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGGTC CGTTGCCGGA CGGCCACCAT CATCCGCAGG CCGTTCCGCA ACGCGGCGTG
ATCGCGGCGT TGGCGCGCGG GCTGGCGCTC TGCAACACCG CGATCGTGGT GCTCGCCGCC
ATTGCCCTGA TCGCCGCCTG CGGCATTCTC AGCTTCAGCG TGCTGAGCCG CAGCCTGTGG
CACAGCGCCA CCTATTGGCA GGACGAGGCC GCGGTGTTCC TGCTGGTCGG CGCCACCTTC
CTCACCGCGG CCTATGTGCA GCAGCAGCGC GGCCATATCG GCATCGAAGC CTTCGTCGGA
TTGTTGCCGC CGATCGTCAA CCGGATCCGG CGCTGGCTGG TCGATGTCGC CAGCCTCGCC
TTCTGCGGCT TCTTCGCCTG GAAATCCTGG ACCCTCACCC ATGAGGCCTA TGTCGACGGC
CAGGTCTCCA ATTCGATGTG GTCGCCGCCT TTGGCGATCC CTTACGGATT GATGGCGGCC
GGCATGACGC TGCTCTGTTT GCAACTACTG GTGCAAGTGC TGGCGCCGGC GGCGCGGAAG
CCGCAGCAAT GA
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| Protein sequence | MHGPLPDGHH HPQAVPQRGV IAALARGLAL CNTAIVVLAA IALIAACGIL SFSVLSRSLW
HSATYWQDEA AVFLLVGATF LTAAYVQQQR GHIGIEAFVG LLPPIVNRIR RWLVDVASLA
FCGFFAWKSW TLTHEAYVDG QVSNSMWSPP LAIPYGLMAA GMTLLCLQLL VQVLAPAARK
PQQ
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