Gene RPC_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2500 
Symbol 
ID3971082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2712813 
End bp2713883 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID637925608 
Producthypothetical protein 
Protein accessionYP_532370 
Protein GI90424000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.257931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGA TGATCAGAGC GCTCTTGACG CTGTGCTTCG CCTGCATTCT CGCCGGCATC 
GCCGGCCCCG GCTTCGCCGC CGAGAAGGAC GAACTGCCGA GCGGCGTCGA ATTGCCGGTG
CGGGTCCGCG TCGGGCTGCG CGTCATCGAC ATCACCGAGA TCAAGGAAGT CGGCGGCCGC
GCCCGGTTGT TCGTCGAAGT CACGCAGCGC TGGAACGACC CGCGCCGCCG GTTCGATCCG
CTGGAAACCG GCGCGCCGCG GATCGATCGG GTCGGCGACG AGGCGCAGCA GTTCGTCGGT
TCGATCTGGA CCCCGGGGCT GGTGATCAGC AATCAGCTGA GCGAGCCGCA ATCGCGCAGC
CAGGCGGTCT CCGCCTATGC GGACGGCGAC GTCGTGCTGG TGGATCGTTA CGAGGCCGAT
TTCCGCGTCG CGATGGACAT GCAGGCGTTT CCGTTCGACC GCCAGCAGAT CGCGCTATCG
TTCTCGCTGC CGCGTTACCC CAAGCAGGAC GCCGTGCTGG TGACCACCGA GACCGACCGG
CTGTTCTCGC GCGTGGAAAA CCGGCTCACC GTGATCGACT GGCGGCCGCT GGCACTCAGC
TTTGCCTATG ACGAATCCAC CGGCTGGAAC GCGCGCAGCT ATTCGCAGCT CAATGCCACG
GTCGGACTCG AACGGATGTC CGAGCGCTAT CTGCTGCGGC TGTTCATTCC GATCATCTCG
ACGCTGGCGG TTTCGATCTT CGTGCTGTGG CTGCCCGGCG CCTCGCCCAA GGACAGCGGC
GGCCTGGTGT TCTCGGCGCT GTTGGCGCTG GCTGCGATCA GTTTCACCTT CGAGGCGAGC
TTTCCCGGCT CGATCTCGCT GAACACGCCG ATCGCCAAAA TCATCTCGCT CGGCTACCTC
TATCTGGTGC TGGTGGTGCT GATCGACGGC GTGGTGGCGG GCTCGTGCAA GGATCCGGCC
TCGCGCTTCC ACGTGCTGGC CTGCGAAGTC CGCGGCCACA CCAAATGGGC GCTGCCGGCG
ATCATGACCA TCGTCTGCGC CGCCGCGGTG ATCCGCGCCA TGCCGGTTTG A
 
Protein sequence
MRAMIRALLT LCFACILAGI AGPGFAAEKD ELPSGVELPV RVRVGLRVID ITEIKEVGGR 
ARLFVEVTQR WNDPRRRFDP LETGAPRIDR VGDEAQQFVG SIWTPGLVIS NQLSEPQSRS
QAVSAYADGD VVLVDRYEAD FRVAMDMQAF PFDRQQIALS FSLPRYPKQD AVLVTTETDR
LFSRVENRLT VIDWRPLALS FAYDESTGWN ARSYSQLNAT VGLERMSERY LLRLFIPIIS
TLAVSIFVLW LPGASPKDSG GLVFSALLAL AAISFTFEAS FPGSISLNTP IAKIISLGYL
YLVLVVLIDG VVAGSCKDPA SRFHVLACEV RGHTKWALPA IMTIVCAAAV IRAMPV