| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2486 |
|---|
| Symbol | |
|---|
| ID | 3971243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2695373 |
|---|
| End bp | 2697133 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637925594 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_532356 |
|---|
| Protein GI | 90423986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.907019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.296957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGT TGTCGCGACG TGACTTCGGA GTAAGCGCTG CGGCGCTGGT GCTCACCGGC
GCTGCCGCGG GGAAGCTTGG TGCCGCCAAC GCCTTGCCGC TGCGCTATCC GATCGACGCC
GATGTCGTGA CCACGCTGCA GCGGACGGTG CTGCCGAAGC CGGCCCCGGC CATCAACATC
CGCCCCGACG AGGTTTCGAA ATACCAGCAA TACGGCTACG GCGGTTGGTC CTTTGGGGCG
CCGCTGAGCT ACGACAAGCG GCTCGATCTC GTCGCGGCCG GCTACCAACC CGCCTCGGTC
TACAATGCCG AAAAGCTGCT GCGCTTCTTC ACCATCACCG ACGTTCACAT CTGCGATAAG
GAGTCGCCGT CGTCGGCGAT CTATCTCGGC CTCAAGCACG GCATTTCGTC GGGCTATTCG
GCGGTGATGT TGGAATCCAC CCACGTGCTC GACGCCGCGG TGCAGACCAT CAACGTGCTA
CACCGCAACG ATCGGTTCGA TTTCGGCATT TCGCTGGGCG ACGTCTGCAA CGACACCCAG
TACAACGAAC TGCGCTGGTA CATCGACGTG CTCGACGGCA AGCCGATCAC GCCGAGCTCG
GGCGCTCATG CCGGGGCCGA TACGATCGGT TACCAGAAGC CCTATCAGGC CGCGGGCCTC
GACAAGTCCA TCAACTGGTA TCAGGCCCTC GGTAATCACG ACCATTTCTG GATGGGCACC
AATCCGGTCA GCGACTATAT CCGCCAGGCG TTCGTCGGCG ACGAGGTGCT GGCGCTCGGC
GACATCTTCG CCGATCCCGA CGGCATCAAT CACCGCGATT ACTACATGGG CACGCTCGAT
GGATCGACGC CCTATGGCGA CGTCGTCTGG GCGGGGCCGG TGGCGGAATT TCCGGCGCCG
CCGAAGCTGG TCGCCGATCC GGACCGCCGC TCGCTGTTGC GCCGGCAATG GATGCAGGAA
TTCTTCTCGA CCAGTTCGCA GCCGATCGGG CACGGCTTTT CGCCGGCGAA CGTCGAACAG
GATTTCGCCT GCTACAGCTT TCATCCCAAT CCGGCGGTGC CGCTGAAGGT GATCGTGCTC
GACGACACCC AGAACGAGCA CGATGCCAAT CCACCGCATT CCGCAACGTC GTCGCCCGGC
TATGGCCACG GTTCGCTCGA TAAGAAGCGT TACGACTGGC TGCTGAAGGA ACTCGCAGAC
GGCCAGGCGG CCGGCGAGTT GATGATCATC GCCGCGCACA TCCCGATCGG CGTCGAGCCG
CCGAGCTCGT TCGTCGGCTG GAATTCCGCG GCCGAGGTGT CCGAGCCGCA ACTGATCGCC
ACGCTGCAGC AATATCCCAA CCTGATCCTG CTGGTCGCCG GGCATCGCCA TTACAATACG
GTGACGGCGT TCAAGTCGCC GGACCCGGCG CGGCCCGAAC TCGGGTTCTG GCAGGTCGAG
ACCGCGTCGT TGCGGGATTT CCCGCAGCAG TTCCGGCTGT TCGACATCGT CCGCAACAGC
GACGACACGC TGTCGATCTT CGCCACCGAC GTCGATCCCG CGGTGAAGGA GGGCACGCCG
GCGGCGGCGT CGCGCAGCCA TGCGGTCGCG GCGCTGCAGA TCTATGCGTC AAGCAAGTTG
ACCCAGGCGC CGCCGCCGCT GCGGCCGACC GGCGCGTACA ATGCCGAACT GGTGATGCCG
TTGAGTGCTG CGATGCAGGC CAAACTGCGT CGCGTCGCGG CGGTGGAGCA GCCGCACGGC
GCCGCCGCAC CAGAGAAATG A
|
|---|
| Protein sequence | MTRLSRRDFG VSAAALVLTG AAAGKLGAAN ALPLRYPIDA DVVTTLQRTV LPKPAPAINI
RPDEVSKYQQ YGYGGWSFGA PLSYDKRLDL VAAGYQPASV YNAEKLLRFF TITDVHICDK
ESPSSAIYLG LKHGISSGYS AVMLESTHVL DAAVQTINVL HRNDRFDFGI SLGDVCNDTQ
YNELRWYIDV LDGKPITPSS GAHAGADTIG YQKPYQAAGL DKSINWYQAL GNHDHFWMGT
NPVSDYIRQA FVGDEVLALG DIFADPDGIN HRDYYMGTLD GSTPYGDVVW AGPVAEFPAP
PKLVADPDRR SLLRRQWMQE FFSTSSQPIG HGFSPANVEQ DFACYSFHPN PAVPLKVIVL
DDTQNEHDAN PPHSATSSPG YGHGSLDKKR YDWLLKELAD GQAAGELMII AAHIPIGVEP
PSSFVGWNSA AEVSEPQLIA TLQQYPNLIL LVAGHRHYNT VTAFKSPDPA RPELGFWQVE
TASLRDFPQQ FRLFDIVRNS DDTLSIFATD VDPAVKEGTP AAASRSHAVA ALQIYASSKL
TQAPPPLRPT GAYNAELVMP LSAAMQAKLR RVAAVEQPHG AAAPEK
|
|---|
| |