| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2478 |
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| Symbol | |
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| ID | 3971235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2686653 |
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| End bp | 2687849 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925586 |
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| Product | major facilitator transporter |
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| Protein accession | YP_532348 |
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| Protein GI | 90423978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.456918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.405324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGG CAGCCCGCGC CGGACTGCCG CCGCTGTTGA ACATCATCGC GCTGTCGGCG
TTCGCCGCCA GCCTGTCGTC GCGCGCGCTC GACCCGGTGC TGCCGCATAT CGCCGAGGAT
TTTGCCGTCG GCATCGCCAC CGCGGCTTCT CTGGCCGCGG TGTTCGCCTT CACCTTCGCG
ATCGTGCAGC CGGCGCTCGG CGCCGCTGCG GATCTGTTCG GCAAAGGCCG GCTGGTGATC
GTCTGCCTGG TGCTGCTCGG GCTCTCCAGC CTGTTCGGGG CGTTTGCGAC CTCGTTCCCG
ATGCTGTTCG CAAGCCGCAT CCTCTCAGGC ATCGGCGCCG GCGGCATCTT TCCGATCGCG
ATGGGGCTGG CCAGCGACAT GGTGGCCCCC GACAAGCGCC AAGTCGCGAT CGGCCGGCTG
CTCGCCGGTG CGATGACCGG CAACCTGCTC GGCGCCTCGG CCTCCGGGCT GATCGGCGAT
CTCTTAGGCT GGCGCGGCGT GCTGGCGGCG CTCGGCATCT TGGTGATCGC GGCGTCGCTG
GCGGTGGCGA TCGGGCTGCG CGGCGCCTCG CTGGCGCGGC CGCCGTCGAA GATGAATCTT
TCGGTGCTGC GGCGGGGCTA CGCCACCATC TTCGCCAATC CCAATGCCAA GATCTGCTTT
GCCGCGGTGT TCATCGAGGG CTGCTGCGTG CTCGGGGTGT TTCCGTTCGT CGCCGCGTTC
CTGTTCGAGC TCGGCGAGCA GCGGCTGGCC ATCGCCGGCC TGGTGATCGC CGGCTTCGCG
GTCGGCGGGC TGTTCTACAC GCTCACCGTG TCGCGGCTGC TGCCGCTTCT CAAGGTCCGC
GGCATGATGA TCGTCGGTGC CGTCTTGGTC GGCTCGCAAT TGGCGGTGGT GGCGCTGGGG
CCGCGCTGGC AGCTGCAGGG TTTAAGCCTG ATCGCGATGG GCTGGGGCTT CTACATGCTG
CACGGCTGCC TGCAGGTGTT CGCCAGCGAA TTGTCGGAAG CCGCGCGCGC GACCGCGCTG
TCGCTGCATT CGTTCTTCTT CTTCATGGGC CAGACCGTGG GCCCGATCGT CTACGGCTTC
GGCCTCGCCC ATCTCGGCAA GCTGCCGACG ATGCTGGTCG CCGCCGCGAT CGTGCTGGCG
CTGGGGCCGC TCTGCGCGCT GTGGATGCGG CAGCTCAAGC CGGCGGATGC GACCTAG
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| Protein sequence | MPQAARAGLP PLLNIIALSA FAASLSSRAL DPVLPHIAED FAVGIATAAS LAAVFAFTFA
IVQPALGAAA DLFGKGRLVI VCLVLLGLSS LFGAFATSFP MLFASRILSG IGAGGIFPIA
MGLASDMVAP DKRQVAIGRL LAGAMTGNLL GASASGLIGD LLGWRGVLAA LGILVIAASL
AVAIGLRGAS LARPPSKMNL SVLRRGYATI FANPNAKICF AAVFIEGCCV LGVFPFVAAF
LFELGEQRLA IAGLVIAGFA VGGLFYTLTV SRLLPLLKVR GMMIVGAVLV GSQLAVVALG
PRWQLQGLSL IAMGWGFYML HGCLQVFASE LSEAARATAL SLHSFFFFMG QTVGPIVYGF
GLAHLGKLPT MLVAAAIVLA LGPLCALWMR QLKPADAT
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