| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2449 |
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| Symbol | lpxB |
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| ID | 3971379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2650832 |
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| End bp | 2652022 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637925557 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_532319 |
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| Protein GI | 90423949 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.31554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG TTGCAACCCA CGCCGTGCGA AAGATCTTCC TGATCGCCAC CGAGGAATCC
GGCGACCGGC TCGGCGCCAG CCTGATGCGC GAGCTGCGCG ATCGGCTCGG TGCAGCCGTG
CGCTTCGAAG GCGTCGGCGG CCGGGCGATG GCGCGCGAGG GCCTCACATC GCTGTTTCCG
ATCGAGGAAT TGTCGATCAT CGGGCTGTCG GCGGTGGCGC GGCGGCTGCC GACCATCCTG
CGCCACATCC GCACCGCGGC GCACGCCGCG TTGCAGGCCG CGCCGGACGT GCTGGTGATC
ATCGACAGTC CGGATTTCAC CCACCGCGTG GCGCGCCGGG TGCGGGCGCG CGACCCGTCG
ATCCCGATCG TCAACTACGT CTCGCCGACG GTGTGGGCGT GGCGGCCGGG GCGGGCGAAG
GTGATGCGCA AATATGTCGA CCACGTGCTG GCGCTGCTGC CGTTCGAGCC GGACGAGTAT
CGCCGGCTGC AGGGGCCGCC TTGCAGCTAT GTCGGCCATC CGCTGACCGA GCAGATTGCC
ACGCTGCGGC CGAACCCTGA GGAGCAATTG CGCCGCGACG CCGCGCCGCC GGTGCTGTTG
GTGCTGCCGG GCAGCCGGCG CAGCGAGATC CGACACCACA TGGCGGTGTT CGGCGAAGCG
CTCGGCCTGT TGCAGGCGCA GGGCGTGGCG TTCGAGTTGA TCCTGCCGAC TATGCCGCAC
CTCGAAGCCT TGATCGCCGA GGCGCTCAAG CACTGGCCGC TGCAGCCGCG CGTCGTGGTC
GGCGAAAACG ACAAGCGCGC GGCGTTTCGC ATCGCCCGCG CGGCGCTCGC CAAGTCCGGC
ACGGTGACGT TGGAACTGGC GGTTGCCGGG GTGCCGATGG TCACGGCCTA TCGCGCCGGC
CAGCTCGAGG CCTGGATCGT GCGGCGACGG ATCACCTCGG CGTCGGTGAT CCTGGCCAAT
CTGGTGGTCG GCGAGAACGT CGCCCCGGAA TATCTGCAGG AGGAGTGCAC GGCGCCGACG
TTGGCCGCGG CATTGCGCGA CGTGCTCGCC GATTCGCCGC TGCGGCAGCG CCAGCTCGCA
GCGTTCGGCC GGATCGACGC CATCATGTCG ACCGGCGCGC AGTCGCCGAG CGCCTGCGCC
GCCGACATCG TGCTGGGACT GTTACCCGCC GCCGCGCCCG CGCTGCGCTA A
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| Protein sequence | MTAVATHAVR KIFLIATEES GDRLGASLMR ELRDRLGAAV RFEGVGGRAM AREGLTSLFP
IEELSIIGLS AVARRLPTIL RHIRTAAHAA LQAAPDVLVI IDSPDFTHRV ARRVRARDPS
IPIVNYVSPT VWAWRPGRAK VMRKYVDHVL ALLPFEPDEY RRLQGPPCSY VGHPLTEQIA
TLRPNPEEQL RRDAAPPVLL VLPGSRRSEI RHHMAVFGEA LGLLQAQGVA FELILPTMPH
LEALIAEALK HWPLQPRVVV GENDKRAAFR IARAALAKSG TVTLELAVAG VPMVTAYRAG
QLEAWIVRRR ITSASVILAN LVVGENVAPE YLQEECTAPT LAAALRDVLA DSPLRQRQLA
AFGRIDAIMS TGAQSPSACA ADIVLGLLPA AAPALR
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