Gene RPC_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2424 
Symbol 
ID3971412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2625224 
End bp2625748 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID637925532 
Producthypothetical protein 
Protein accessionYP_532294 
Protein GI90423924 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0361451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0654459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAT CCCGCGTAAT GGCCTCTGCG GCGCTGATCC TGGTGTCGAC AATCGCCGCG 
CAAGCCGAGG ACGCCAAGGT CGGCGATCTG CTGATCACGC AGCCCTGGAG CCGGGCCACG
CCGGGCGGTG CCAAGGTGGC CGGCGGTTAT CTCACCATCG AGAATAAGGG CACCGCGCCG
GACCGTCTGC TGAGCGGCAC CGCTGCGATT GCCGGCAAGG TCGAACTGCA TGAGATGAGC
ATGGATAACG GCGTGATGAC GATGCGGCCG CTCGACAAGG GATTGGCGAT TGCGCCGGGC
CAAAGCATCA AGCTGGCACC GGGCGGTTAT CACCTGATGC TGATGGACCT CAAGGGTGGC
CTGATCCAGG GCGCGCGGGT GCCGGTGACG CTGACCTTCG AGAAGGCCGG CAAGGTCGAC
GTCAATCTCG ACGTGCAGGG CGTCGGCGCG CAGGCACCGG CCGCCAGCAG CGGCGACGCC
CACAAGATGG CGCCCGATCA CTCCGGCATG AAGATGTCGA AGTGA
 
Protein sequence
MKISRVMASA ALILVSTIAA QAEDAKVGDL LITQPWSRAT PGGAKVAGGY LTIENKGTAP 
DRLLSGTAAI AGKVELHEMS MDNGVMTMRP LDKGLAIAPG QSIKLAPGGY HLMLMDLKGG
LIQGARVPVT LTFEKAGKVD VNLDVQGVGA QAPAASSGDA HKMAPDHSGM KMSK