Gene RPC_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2311 
Symbol 
ID3973269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2511071 
End bp2513599 
Gene Length2529 bp 
Protein Length842 aa 
Translation table11 
GC content63% 
IMG OID637925419 
Productorganic solvent tolerance protein 
Protein accessionYP_532184 
Protein GI90423814 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCCG CCCTTCCGGA GAGGCATTTG ATTTCGCGGC GCGGCCGTTT TGGCGCGTCT 
CGCTTTGTCA TGTCTCGCTT TGTCACGTCT TCCGTTCTGA GCGCGCTCGG CGCGGTGGTG
TTGGCGGCGG CGCTTGGTGT CCCCGCGGCA ACGCCCGTGG CTGCCCAGAG TTTCACCTTC
AATCAGCCGC CGGTTCGTCC GAAAGCGCCG CCTGCGCCCG ATAGCGGGCA GATGCTGGTT
CAGGCCACCG AGGTCGATTA CGATTACAAC AACTCGCGGG TGTCGGCGGT CGGCAACGTG
CAGATGTTCT ATGGCGGCAC CACCGTCGAG GCCGACCGGG TCGTCTACGA CCAGAAGACC
AAGCGGCTGC AGGCCGAGGG CAACGTCCGC ATGACCGATG CGGACGGCAA GATCACCTAC
GCCAACCAGT TGGATCTGAG CGACGACTAC CGCGACGGTT TCGTCGATTC GCTGCGGGTC
GACACCGCCA ACCAGACCCG CATCGCGGCG TCGCGGGCGG AGCGCACCGA AGGCGCCTAT
AACGTGTTCC AGAACGGCGT CTACACCGCC TGCGCGCCGT GCCGGGACAA TCCCAAGAAG
CCGCCGCTGT GGCAGGTCAA GGGCGCCCGC ATCATCCACG ATCAAAACGA GAAGATGCTG
TATTTCGAGA ACGCCCAGCT CGAATTCTTC GGCGTCCCGT TGGCCTATCT GCCGTATTTC
TCGACGCCGG ACCCCACCGT CCAGCGCAAG ACCGGCTTTC TGATGCCGAT CTATCTCTCG
AGCACGGCGT TCGGCTCGGG CTTCGAAGTG CCGTTCTACT GGGCGCTGGC GCCGGATTAC
GACTTCACCA TCTCGCCGCG CTACACCACC ACCCAGGGCG TGTTGATGCA GGGCGAATTC
CGCCAGCGTC TGCTGGACGG CGCCTATCAA ATTCGCGCCT ATGGCATCAA CCAGCTCGAT
CCGGACAATT CGAATCTGGC CACCACCGCG CAACGCGAGT TCCGCGGCGC CATCGACACC
AAGGGCCAGT TCGCGCTGAA CGACAAATGG GTCTGGGGTT GGGACGGCGT CCTGATGTCC
GACAAGACCT TCTTCGTCGA TTACCGGCTG GCGCAGTACA AGGACACGCT GGGCACCTTC
CTCAGCCAGT CCAACGAGGC GACCTCGGAC CTCTATCTGA CCGGTGTCGG CAACCGCAGC
TATTTCGACG CGCGGGCGTT CTACTTCCAG GGCTTCACCG GCTATGACGT GCAGAGCCAG
ATCCCGGTGG TGCTGCCGGT CATCGACTAT GCCAACGTCT TCAACCGGCC GATCCTCGGC
GGCGAAGTCA GCTACAAGAC TAACCTGACC AGCATCAACC GACAGAGCGC CGATTTTGAC
GCGCTGACGA GCGCGGCAAG TCAACAGGAC CTGTGCAGCA CCAGCTCGAT CGCGCAGATG
TCCGCCGACA AATTAGCGAA CCTCAGGAAC AACTGCCTGC TGCGCGGCAT CCCCGGCACC
TACACCCGGT TCAGCGCCGA GGCGCAGTGG CGGCGCTCCT ATACCGATCC CTACGGCCAG
ATCTGGACGC CGTTCGCCTC GCTGCGCGCC GACGCCATCG ACGCCTCGAT CTCCAACCAG
CCCGGCGTGT CCAATTACAC CAGCGACACC CAGGCGCTGC GGGTGATGCC GACGGTGGGT
CTGGAATATC GCTATCCCTT CATCAACGTG CAGCCGTGGG GCACCACCAC GGTGGAGCCG
ATCGCGCAGA TCATCGTTCG CCCGAACGAA ACCTACGCCG GCAAGCTGCC CAACGAAGAC
GCCCAGAGCA TGGTGTTCGG CGCCGACAAC CTGTTCAGCG TCGACAAGTT CTCCGGCTAC
GACCGCGTCG AGGGCGGCGG CCGCGCCAAT GTCGGCGTGC AGGCCACCAC CCAATTCGAC
AAGGGCGGCT CGGTCAACGT GCTGTTCGGT CAGTCCTATC AGCTGTTCGG CATGAACTCC
TACGCCGTCG CCGACCTGAT CAATACCGGA CTGGATTCCG GACTGGATAA GCCGCGCTCG
GATTATGTGG CGCGGGCCTC CTATTCGCCG AACAGCACCT TCAAATTCAC CACGCGTGCG
CGGTTCGACG AGGCCACGGC CAGCGTGCAG CGCTTCGAAG CCGAGGGCAG CGCCAGCTTC
AATCGCTGGT CGGTGTCGAT GATCTACGGA AACTATGCCG CGCAGCCGGA TCTGGGCCTG
CTGGACCGCC GTGAGGGCAT CCTGGGAACC GGCTCGATCA AGCTCGCCTC GAACTGGGTG
GTGACCGGCG GCGCACGCTG GGATCTCGAA GCCAACAAGA TCGATCAATA CATCATCGGC
GCCGGCTATG TGGACGACTG CTTCGTGATG GCGCTCAATT ATGTGACCGC CTATTCTTAT
TCGAACAGTG CGCTGGTTGC GCCCACACTT AGCCACTCCG TCATGTTTCA GATCGGGTTG
CGAACGATCG GCACCTTCGC GCTCGCGCAG AGCGTGTCCG GTGCCTCGAA CGGCCTGATC
GGCCAATAA
 
Protein sequence
MVAALPERHL ISRRGRFGAS RFVMSRFVTS SVLSALGAVV LAAALGVPAA TPVAAQSFTF 
NQPPVRPKAP PAPDSGQMLV QATEVDYDYN NSRVSAVGNV QMFYGGTTVE ADRVVYDQKT
KRLQAEGNVR MTDADGKITY ANQLDLSDDY RDGFVDSLRV DTANQTRIAA SRAERTEGAY
NVFQNGVYTA CAPCRDNPKK PPLWQVKGAR IIHDQNEKML YFENAQLEFF GVPLAYLPYF
STPDPTVQRK TGFLMPIYLS STAFGSGFEV PFYWALAPDY DFTISPRYTT TQGVLMQGEF
RQRLLDGAYQ IRAYGINQLD PDNSNLATTA QREFRGAIDT KGQFALNDKW VWGWDGVLMS
DKTFFVDYRL AQYKDTLGTF LSQSNEATSD LYLTGVGNRS YFDARAFYFQ GFTGYDVQSQ
IPVVLPVIDY ANVFNRPILG GEVSYKTNLT SINRQSADFD ALTSAASQQD LCSTSSIAQM
SADKLANLRN NCLLRGIPGT YTRFSAEAQW RRSYTDPYGQ IWTPFASLRA DAIDASISNQ
PGVSNYTSDT QALRVMPTVG LEYRYPFINV QPWGTTTVEP IAQIIVRPNE TYAGKLPNED
AQSMVFGADN LFSVDKFSGY DRVEGGGRAN VGVQATTQFD KGGSVNVLFG QSYQLFGMNS
YAVADLINTG LDSGLDKPRS DYVARASYSP NSTFKFTTRA RFDEATASVQ RFEAEGSASF
NRWSVSMIYG NYAAQPDLGL LDRREGILGT GSIKLASNWV VTGGARWDLE ANKIDQYIIG
AGYVDDCFVM ALNYVTAYSY SNSALVAPTL SHSVMFQIGL RTIGTFALAQ SVSGASNGLI
GQ