Gene RPC_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2307 
Symbol 
ID3973748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2507058 
End bp2508113 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID637925415 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_532180 
Protein GI90423810 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.33984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA TGCGTCGGCA ATCGCTCGTC AAGTTCGACG CACCGCTGTG CGAGACCATC 
GTGCCCACGC CGCAGCCGCA GGGCCGCGAA GTGTTGGTCC GGATCGAGCG CTGCGGGCTG
TGCCATTCCG ATCTGCATAT CCAGGACGGC TACGCCGATC TCGGCTCCGG CAAGCGGCTC
GACACCACCA AGGGCATGAC GCTGCCCTTT ACGCTCGGCC ACGAGATCGC CGGCGTGGTC
GAAGAGGTCG GCCCCGACGC CCCGGCCGAA CTGATCGGCC GCAACAAGGC GGTGTTTCCC
TGGATCGGCT GCGGCCAGTG CCGCGACTGC CTCAACGACG ACGAAAATCT CTGCACGCGC
AACCGCTTTC TCGGCGTTGC GATCGATGGC GGGTTCTCCA CCCACGTGCT GGTGCCGGAC
GCCAAATATC TGCTCGACTA CGATCCGTTG CCGATCAACC AGGCGGCGAC GCTGATGTGC
TCGGGCGCCA CCGCCTACGG CGCGCTGAAG CGCCTCGTCG ATCGCAAGCG GCAGCGCAAC
CTGTTGCTGA TCGGGCTGGG CGGCGTCGGC ATGATGGGAT TGTCGCTGGC GAAGTCGATG
TTCAAGCAGG ACATCAGCGT GGCCGACATC AATCCGGCGG CGCGGGAAAC CGCACTGAAG
AACGGCGCCG CCACCGCCTA CGATCCCACC GAGCCCGATC TAATCAAGCG CATCATGAAA
GAGACCGGCG GCTTCGACGC CATCGTCGAT TTCGCCGGCA ACGACAGATC GATGGGCTTT
GCGACCAGCG TGGTGGCGCG CGGCGGCAAG ATCGTGGTGT CCGGACTGAT GGGCGGCAGC
TTTACGATGC CGATGGTGAA CTGGATCTAC AAGCGGATGA CCATCGAAGG CTTCATGACC
GGGACGCTGA CCGAAGCCAA GGAATTGCTG GAGCTGGCGC GCGCCGGCAA CATCGCGCCG
ACGCCGATGC AGGAACAGCC GATGGCCGAG GTGCAGACAT GGATCGACGA ATTGCGCGCC
GGCCACGTCG TCGGCCGCAT CGTGCTGACC AACTAA
 
Protein sequence
MALMRRQSLV KFDAPLCETI VPTPQPQGRE VLVRIERCGL CHSDLHIQDG YADLGSGKRL 
DTTKGMTLPF TLGHEIAGVV EEVGPDAPAE LIGRNKAVFP WIGCGQCRDC LNDDENLCTR
NRFLGVAIDG GFSTHVLVPD AKYLLDYDPL PINQAATLMC SGATAYGALK RLVDRKRQRN
LLLIGLGGVG MMGLSLAKSM FKQDISVADI NPAARETALK NGAATAYDPT EPDLIKRIMK
ETGGFDAIVD FAGNDRSMGF ATSVVARGGK IVVSGLMGGS FTMPMVNWIY KRMTIEGFMT
GTLTEAKELL ELARAGNIAP TPMQEQPMAE VQTWIDELRA GHVVGRIVLT N