Gene RPC_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2253 
Symbol 
ID3973097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2456673 
End bp2457077 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content62% 
IMG OID637925361 
ProductAtsE 
Protein accessionYP_532126 
Protein GI90423756 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.797018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.537968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTC CTCAGGGAAC AATCGTGGCT GTGGCCGACG GCGAGAAGTT CAATCTGTTT 
CAGAACACCG GCGACGAGGC CAACCCGGCG CTGACCGCGC TGCCCGAGGC GGATATCGAG
AGCGCCAACA AGGGATCAGG CTCAAGCCAT CAAAACAGCT CGTCCAATCC GGACGAGAGC
CAGGCCGCCG AAGACGGCTT CGCCGGCGGC ATCGCCGATC TCTTGAACAA GCGGGTGCTC
GACGGCAAGA TCGCCGACCT GGTGATCATC GCCGCGCCGC GAACGCTCGG CGAATTGCGC
AAAAGCTACC ACAAGAAATT GGCCGACGTG CTGCGCGGCG AGATCTCCAA GGATCTCACC
GGTCACCCGC TGCACGACAT CGAGAAGACC ATCGCGGCGG CGTAA
 
Protein sequence
MLLPQGTIVA VADGEKFNLF QNTGDEANPA LTALPEADIE SANKGSGSSH QNSSSNPDES 
QAAEDGFAGG IADLLNKRVL DGKIADLVII AAPRTLGELR KSYHKKLADV LRGEISKDLT
GHPLHDIEKT IAAA