Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2253 |
Symbol | |
ID | 3973097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2456673 |
End bp | 2457077 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637925361 |
Product | AtsE |
Protein accession | YP_532126 |
Protein GI | 90423756 |
COG category | [N] Cell motility |
COG ID | [COG5622] Protein required for attachment to host cells |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.797018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.537968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTTC CTCAGGGAAC AATCGTGGCT GTGGCCGACG GCGAGAAGTT CAATCTGTTT CAGAACACCG GCGACGAGGC CAACCCGGCG CTGACCGCGC TGCCCGAGGC GGATATCGAG AGCGCCAACA AGGGATCAGG CTCAAGCCAT CAAAACAGCT CGTCCAATCC GGACGAGAGC CAGGCCGCCG AAGACGGCTT CGCCGGCGGC ATCGCCGATC TCTTGAACAA GCGGGTGCTC GACGGCAAGA TCGCCGACCT GGTGATCATC GCCGCGCCGC GAACGCTCGG CGAATTGCGC AAAAGCTACC ACAAGAAATT GGCCGACGTG CTGCGCGGCG AGATCTCCAA GGATCTCACC GGTCACCCGC TGCACGACAT CGAGAAGACC ATCGCGGCGG CGTAA
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Protein sequence | MLLPQGTIVA VADGEKFNLF QNTGDEANPA LTALPEADIE SANKGSGSSH QNSSSNPDES QAAEDGFAGG IADLLNKRVL DGKIADLVII AAPRTLGELR KSYHKKLADV LRGEISKDLT GHPLHDIEKT IAAA
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