Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2202 |
Symbol | |
ID | 3972761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2402383 |
End bp | 2403198 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925310 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_532075 |
Protein GI | 90423705 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.52559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGAGA CGACGACGAT AACCGCCACC ACCGCGAGCG ACGAACCCAC CGACAGCACG CCGATCCTGA CCATCGCCGG CGCGCGCGCC GAGATCCGGC TGAACCGGCC GCGGCATCTC AACCGGCTAT TGCCGGACGA CCTCGACGCG CTGATGCGGC AGTTCGAGCA AATCGAAGGC GATCCGGCGC TGCGGGTGCT GGTCTTGACC GGCACCGGGC GGGCGTTTTC CGCCGGCTTC GATCTCGGCA AGGTTGCGGA GCGCGCCGCC GCGGAGGCCG CGCAGCCCAG CGCCGGGGCG GCGTTCGAGG TGGTCGCCAA CCGGCTCGAG GATCTTGCGC TGCCGACCAT CTGCCGGCTC AATGGCGGGG TCTATGGCGG CTCCACCGAT CTGGCGCTGG CCTGCGATTT CCGCATCGGC GCCGAGGGCT GCGAAATGTT CATGCCGGCG GCACGGCTCG GGCTGCACTA CTACAAGAGC GGGATTCGCC GCTACGTGTC GCGGCTCGGC GTCGACAACG CCAAGAAGCT GTTCCTCACC GCACAGAAGA TCGACGCCCG CGAGATGCTG CGGATCGGCT ATCTCACCGC CTTGGTGCCG ATGAAGCGGC TCGACGCCGA GGTCGACGCG CTGGCGACCA TCCTGGCCGG CAACGCACCG CTGGCGATGG CCGGCATGAA GCGGGCGATC AACGAATTCG CCCGCGATCA GCTCGACGAG GCGGCCGCCG ATCAACGCGC CCAGGACAGC ATGCAGAGCG CCGAAATCAA CGAAGGCATC GCCGCCTTCA AGGAGAAGCG CGCGCCGCGG TTTTGA
|
Protein sequence | MSETTTITAT TASDEPTDST PILTIAGARA EIRLNRPRHL NRLLPDDLDA LMRQFEQIEG DPALRVLVLT GTGRAFSAGF DLGKVAERAA AEAAQPSAGA AFEVVANRLE DLALPTICRL NGGVYGGSTD LALACDFRIG AEGCEMFMPA ARLGLHYYKS GIRRYVSRLG VDNAKKLFLT AQKIDAREML RIGYLTALVP MKRLDAEVDA LATILAGNAP LAMAGMKRAI NEFARDQLDE AAADQRAQDS MQSAEINEGI AAFKEKRAPR F
|
| |