Gene RPC_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2202 
Symbol 
ID3972761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2402383 
End bp2403198 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID637925310 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_532075 
Protein GI90423705 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.52559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGA CGACGACGAT AACCGCCACC ACCGCGAGCG ACGAACCCAC CGACAGCACG 
CCGATCCTGA CCATCGCCGG CGCGCGCGCC GAGATCCGGC TGAACCGGCC GCGGCATCTC
AACCGGCTAT TGCCGGACGA CCTCGACGCG CTGATGCGGC AGTTCGAGCA AATCGAAGGC
GATCCGGCGC TGCGGGTGCT GGTCTTGACC GGCACCGGGC GGGCGTTTTC CGCCGGCTTC
GATCTCGGCA AGGTTGCGGA GCGCGCCGCC GCGGAGGCCG CGCAGCCCAG CGCCGGGGCG
GCGTTCGAGG TGGTCGCCAA CCGGCTCGAG GATCTTGCGC TGCCGACCAT CTGCCGGCTC
AATGGCGGGG TCTATGGCGG CTCCACCGAT CTGGCGCTGG CCTGCGATTT CCGCATCGGC
GCCGAGGGCT GCGAAATGTT CATGCCGGCG GCACGGCTCG GGCTGCACTA CTACAAGAGC
GGGATTCGCC GCTACGTGTC GCGGCTCGGC GTCGACAACG CCAAGAAGCT GTTCCTCACC
GCACAGAAGA TCGACGCCCG CGAGATGCTG CGGATCGGCT ATCTCACCGC CTTGGTGCCG
ATGAAGCGGC TCGACGCCGA GGTCGACGCG CTGGCGACCA TCCTGGCCGG CAACGCACCG
CTGGCGATGG CCGGCATGAA GCGGGCGATC AACGAATTCG CCCGCGATCA GCTCGACGAG
GCGGCCGCCG ATCAACGCGC CCAGGACAGC ATGCAGAGCG CCGAAATCAA CGAAGGCATC
GCCGCCTTCA AGGAGAAGCG CGCGCCGCGG TTTTGA
 
Protein sequence
MSETTTITAT TASDEPTDST PILTIAGARA EIRLNRPRHL NRLLPDDLDA LMRQFEQIEG 
DPALRVLVLT GTGRAFSAGF DLGKVAERAA AEAAQPSAGA AFEVVANRLE DLALPTICRL
NGGVYGGSTD LALACDFRIG AEGCEMFMPA ARLGLHYYKS GIRRYVSRLG VDNAKKLFLT
AQKIDAREML RIGYLTALVP MKRLDAEVDA LATILAGNAP LAMAGMKRAI NEFARDQLDE
AAADQRAQDS MQSAEINEGI AAFKEKRAPR F