Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2183 |
Symbol | |
ID | 3969165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2378695 |
End bp | 2379195 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925291 |
Product | cupin 2, barrel |
Protein accession | YP_532056 |
Protein GI | 90423686 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0487258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCAACG ATAGAACGAC GACGCACGGC GAAACCGAGC CACGGAGCGA ACAACCGGGG ATCCGCGCTG CGGCCGGTCC CGGCCGATGG CACGACGTCG AGTTGATGGC CTACAAGCCG GACGACGCCG CGCCGTTCCG CTCGGTCACC CGGCAGGTGC TGTTCTCCGA TCTGCGACTG GGCTGCGAGT GGCGCTACTT CGAAGTCGCC GAGGGCGGCT ATTCCACGCT GGAACGGCAC CAGCACGTTC ATGCCACGAT GATCCATCGC GGCCGTGGCC AATGCCTGGT CGGCGACGTG ATCAGCGACG TCGCGGTCGG CGACCTGGTG TTCATCCCGC CGATGACTTG GCATCAGTTC CGCGCCAACG CCGGCGACGT GCTCGGCTTC CTGTGCCTGG TCAACGCCGA CCGCGACCGC CCGCAACTGC CGCGCCCGGA CGAACTCGCC GTCCTGCGTC AGAACAAGGC GATCGCGTCG TTCATCGGCG CGGAAGCGTA A
|
Protein sequence | MVNDRTTTHG ETEPRSEQPG IRAAAGPGRW HDVELMAYKP DDAAPFRSVT RQVLFSDLRL GCEWRYFEVA EGGYSTLERH QHVHATMIHR GRGQCLVGDV ISDVAVGDLV FIPPMTWHQF RANAGDVLGF LCLVNADRDR PQLPRPDELA VLRQNKAIAS FIGAEA
|
| |