| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2180 |
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| Symbol | |
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| ID | 3969162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2373394 |
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| End bp | 2374620 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637925288 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_532053 |
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| Protein GI | 90423683 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGAA GCCGCGACCA GACTGCCCGC ATTCTGCCGG TCGAAACGGA TGTCGACAGC
GTGCCGGCGC GCGTCGCAGC GCCTGCCCAT GATCCGGTGC GCCCGCAGCC GGAGCAGACG
GCGTCGCCGC GCGCCGAGGC GCCGATGCAG GACCAGCCGC AGGCCACCGA CAAGGTCCCG
CCCCGCACCG CCAACAAGTC CAACAAGCGC AAGCTGATCG GGCTCGGCGT CGCGGCATTG
TTGGCGCTCG CCGCGATCTA TTTCGGCGTC AACTACATGC TGGTCGGCCG CTTCCTGGTC
GGCACCGACG ACGCCTATGT GCGGGCCAAC AACACCACGC TCGGCGCTCG GGTGTCGGGA
CATCTCGCCG CGATCCTGCC CGGCGACAAC GTCCAGGTTC GCGCCGGCGA CGTCGTGTTC
CGGATCGACG ATGGCGACTA CCGGATCGCG GTCGACTCCG CACGCGCCAA GATCGCCACG
CAACAGGCGA CCATCGAGCG GATCGGCCGC CAGGTCACCG CGCAGCTCAG CGCCGTCGAG
CAGGCCAAGG CGCAGCTCGC CTCTGCCGAC GCCGCCTCGA AGCGCGCCGG GCTGGATTTC
GATCGCCAGC AGGCGCTCAG CACCAAGGGC TTCGCGTCGC GCGCCACCTT CGAAGTGTCG
CAGGCCGGCC GCGATCAGGG GGCGGCGGCG GTGCAGGCCG CCCAGGCGGC CTATGCGGCG
GCGAGCGACA ATGTCGAAGT CACCAAGGCG CAGCAGCTTG AGGCCCGCGC GCAACTCGTC
GAACTGCAGG CGGCACTGGC CAAGGCCCTG CGCGATCTGG ATTTCACCAT CGTGCGCGCG
CCGGTCGACG GCATCTTCTC CAACCGCCTG GTCAACACCG GCGACTTCAT CCAGGCCGGG
CAGCGGCTCG GCAATGTGGT GCCGCTCGAC GACGTCTATA TCGACGCCAA CTTCAAGGAG
ACCCAGCTGC GCCGGCTGAA GCCCGGCCAG AAGGTCGACA TCTCGGTCGA CGCCTTCAGC
AATCGGCACA TCGAAGGAAC GCTCGACAGC CTGTCGCCGG CCGCCGGCGC GGTGTTCACG
CTGCTGCCGC CGGACAACGC CACCGGCAAT TTCACCAAGA TCGTGCAGCG CGTGCCGGTG
CGGGTGAAGG TGCCGGCCGC TGTGGCGCGC GAGAACATGC TGCGCGCCGG CATGTCGGTC
TACGTCAGCG TCAACACCAA GGACTAA
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| Protein sequence | MAGSRDQTAR ILPVETDVDS VPARVAAPAH DPVRPQPEQT ASPRAEAPMQ DQPQATDKVP
PRTANKSNKR KLIGLGVAAL LALAAIYFGV NYMLVGRFLV GTDDAYVRAN NTTLGARVSG
HLAAILPGDN VQVRAGDVVF RIDDGDYRIA VDSARAKIAT QQATIERIGR QVTAQLSAVE
QAKAQLASAD AASKRAGLDF DRQQALSTKG FASRATFEVS QAGRDQGAAA VQAAQAAYAA
ASDNVEVTKA QQLEARAQLV ELQAALAKAL RDLDFTIVRA PVDGIFSNRL VNTGDFIQAG
QRLGNVVPLD DVYIDANFKE TQLRRLKPGQ KVDISVDAFS NRHIEGTLDS LSPAAGAVFT
LLPPDNATGN FTKIVQRVPV RVKVPAAVAR ENMLRAGMSV YVSVNTKD
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