Gene RPC_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2114 
Symbol 
ID3973670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2314574 
End bp2315110 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID637925222 
ProductMgtC/SapB transporter 
Protein accessionYP_531987 
Protein GI90423617 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.170064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGAGT GGTCGGAGAT CGTCCTGCGC CTTGGCGTCG CTACCCTGGC CGGTGGCGCG 
ATCGGACTCA ATCGCGACCT GCACGGCAAG CCGATCGGCG TCCGCACGCT GGGGCTCGTC
AGCCTCGCCT CCGCGGTGGT GGTGATGTTG GCCGATCCCG GCGACAGCGT CGGCCGCATC
ACCGACGCCA CCAGCCGGGT AATTCAGGGC ATCCTGACCG GCATCGGGTT TCTCGGCGCC
GGCGTGATCA TGCGCTCGCC GCACCGCGCC AGGGTCCGCG GCCTGACCAG TGCCGCCTGC
ACCTGGCTCA CCGCCTGCGT CGGCATCGTT TGCGGCGCCG GGCAATGGCG CATCGTCGGC
GTGGCGCTGG CGATCGCCTT CGTCATCCTG CTGATCGGCG GCCCGTTGGA GCGCACGCTG
CATCGGCTGC TCGGCGGCAA GGACGAGCAA GCGGAAAAGC CGCCCGCCGG GACAGCGCCG
GGCGATGCAG GCGCCGTCGA CGCCGCCGGA CCTGATCGAA CAACCAAGCC AGAGTGA
 
Protein sequence
MIEWSEIVLR LGVATLAGGA IGLNRDLHGK PIGVRTLGLV SLASAVVVML ADPGDSVGRI 
TDATSRVIQG ILTGIGFLGA GVIMRSPHRA RVRGLTSAAC TWLTACVGIV CGAGQWRIVG
VALAIAFVIL LIGGPLERTL HRLLGGKDEQ AEKPPAGTAP GDAGAVDAAG PDRTTKPE