Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2090 |
Symbol | |
ID | 3971855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2287987 |
End bp | 2289543 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925198 |
Product | hypothetical protein |
Protein accession | YP_531963 |
Protein GI | 90423593 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.647831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCCACG CCATGAACGG CGCACATTCG GTTGTGCAGA CCCTGGTCAA TTGCGGCGTT GAAGTCTGCT TCGCCAATCC CGGCACCTCG GAAATGCATT TTGTCGCAGC GCTCGATGCG GTCGGCGGCA TGCGGCCGGT GCTGTGCCTG TTCGAAGGCG TGGCGACCGG CGCCGCCGAC GGCTACGGCC GGATCGCCGG CAAGCCGGCG GCGACGCTGC TGCACCTCGG CCCCGGCCTC GCCAACGGCC TCGCCAATCT GCACAACGCG CGGCGCGCGG CGAGCCCGAT CGTCAATGTG GTCGGCGATC ACGCCACCTA TCACCTGCAA TACGATGCGT TGCTGACCTC GGACATCGCC GGCTTCGCCC GGCCGGTGTC GTCGTGGATT CATCAATCGA CCAGCGCCGG CAGTGTCGGC GCAGACGCCA CGCGCGCGGT GCAGGCGGCG CGCTCAGCGC CGGGCGGCAT CGCCACTTTG ATCATGCCGG CCGACGTGGC GTGGAACGAA GCCGCGCTCG CGGCGCACAA GCTCGACGAT ATTGGCCCCT CGCGGGTTGC CGCTGACAGC ATCGAGGCCG TCGCGGCGCT GCTCGGCAAC GGCAAGAAAT CCGCGCTGCT GATCCGCGGC GATGGCTTGC GCGGCGCCGG CCTCGAGGCC GCCGGGCGCA TTCAAGCCAA AACCGGCGCG AGGCTGTTGT GCGACACCTT CGCGCCGCAT GGCGAATTCG GCGCCGGCCG GGTGCCGGTC GAGCGCATTC CGTATTTCGC CGAACAGATC GTGATGTTCC TAAAGGATGT CGAGCAACTG ATCCTGGTCG GCGCTAAGCC GCCGGTGTCG TTCTTCGCCT ATCCCGGCAA GCCGAGCTGG GGCGCGGCGG AGGGCTGCGT CTTCAGTTAC TTGGCACAGC CGACCGAGGA CTGCGCCCGC GCGCTGCAAG ATCTCGCCGA CGCGCTGGAT GCGCCGGCCG AACCCGCGAC GCGCACCCCG CTGGTGCTGC CGGAATTGCC GAAGGGCAAG CTGAACTCGC TCGGCGTGGC GCAAGTGATC GCGCATTACA CCCCCGACAA CGCGATCTAC GCCGACGAAT CCGCCACCTC CGGGCTGGCG CTGATGATCC ATCTGGCGCG GGCGCGGCCC TATACGCATC TGCCGCTGGC CGGCGGTTCG ATCGGGCAGG GACTGCCGCT CGCGGTCGGC GCGGCACTCG CCGCCCCGGA CCGCAAGGTG GTGTGCCCCT CCGGCGACGG CGGCGCCGCC TACACGCTGC AGGCGCTGTG GACCATGGCG CGGGAAAATC TCGACGTCAC CGTGGTGATC TTCGCCAACC ATTCCTACGC GATTTTGAAC ATCGAGCTGC AGCGGGTCGG CGTCGGCAGC GCCGGTGCCA AGGCGCTGTC GATGCTCGAT CTGCACAATC CGGAAATCAA CTGGGTGCAG ATCGCCTCCG GCCTCGGGGT CGCGGCCAGC CGCGCCACCA CGGCAGAAGA ATTCACCGCG CAATACGCCG ACGCGATGGC GCAGCGCGGA CCCCGCCTGA TCGAAGCGAT GATTTAG
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Protein sequence | MGHAMNGAHS VVQTLVNCGV EVCFANPGTS EMHFVAALDA VGGMRPVLCL FEGVATGAAD GYGRIAGKPA ATLLHLGPGL ANGLANLHNA RRAASPIVNV VGDHATYHLQ YDALLTSDIA GFARPVSSWI HQSTSAGSVG ADATRAVQAA RSAPGGIATL IMPADVAWNE AALAAHKLDD IGPSRVAADS IEAVAALLGN GKKSALLIRG DGLRGAGLEA AGRIQAKTGA RLLCDTFAPH GEFGAGRVPV ERIPYFAEQI VMFLKDVEQL ILVGAKPPVS FFAYPGKPSW GAAEGCVFSY LAQPTEDCAR ALQDLADALD APAEPATRTP LVLPELPKGK LNSLGVAQVI AHYTPDNAIY ADESATSGLA LMIHLARARP YTHLPLAGGS IGQGLPLAVG AALAAPDRKV VCPSGDGGAA YTLQALWTMA RENLDVTVVI FANHSYAILN IELQRVGVGS AGAKALSMLD LHNPEINWVQ IASGLGVAAS RATTAEEFTA QYADAMAQRG PRLIEAMI
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