| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2042 |
|---|
| Symbol | |
|---|
| ID | 3973961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2223854 |
|---|
| End bp | 2224363 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637925151 |
|---|
| Product | transposase and inactivated derivative |
|---|
| Protein accession | YP_531916 |
|---|
| Protein GI | 90423546 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.964453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCAG CAGTGCCATT GCGAACGGAT TTTTCGGCCG GCGAGCTTCG GCTTTTGGCG
AAGCGATCGA AGGACAACAA CCAAAGCCGG CGGCTGTTGT CGTTGGCGGC GATTGTAGAC
GGGATGAACC GGACCGACGC AGCCCGGATC GGCGGGATGG ATCGACAGAC GCTGCGGGAC
TGGGTTCATC GCTTCAGCGA AGCTGGACCC GAGGGGCTGC TGGACAACTG GGCCAGTGGA
CCGGCTTCAC GGCTGTCGCC AGATCAGCAG GCCGAACTCG CGGCGATCGT GGAGGCCGGC
CCCGATTGGG AGGCAGACGG CGTGGTCCGC TGGCGGCGCG TCGATCTGAA GCGAGTGATC
TTCGAGCGCT TCGGCGTCGA ATATCATGAG CGGCATGTCG GGACGCTGTT GAAGAAGCTC
GGCTTCTTGC ACATCAGCGC GCGGCCGCGT CATCCCGGGC AGGATGCCGA GATCGTCGAG
GCTTTCAAAA AAACTCCACG CGCGCATTGA
|
|---|
| Protein sequence | MPSAVPLRTD FSAGELRLLA KRSKDNNQSR RLLSLAAIVD GMNRTDAARI GGMDRQTLRD
WVHRFSEAGP EGLLDNWASG PASRLSPDQQ AELAAIVEAG PDWEADGVVR WRRVDLKRVI
FERFGVEYHE RHVGTLLKKL GFLHISARPR HPGQDAEIVE AFKKTPRAH
|
|---|
| |