Gene RPC_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2040 
Symbol 
ID3973959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2222443 
End bp2222967 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID637925149 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_531914 
Protein GI90423544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.363587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG GCGCGATCCA GCCGGTTCCG CCATTGATGA CCGAACGGCT GCGGCTGGCG 
CGACGGCGGA TCGCGGATCT CGAAGACTGC CTCGCCATGG ACATGGATCC GCGCGTCGCG
GCCTACGCCT TCGACCAGAT CGAGCCGCAT CAGCACCGCG CCCGGATTCG CGCCGCGATC
GCGGCCGACC AAGACCCGCA ACTCGGATTC TGGACCGTGC GCGATCGCAG CTCCGACCAA
TTTGTCGGCT GGGTCTATGT CAAGCCGTTC CAGCAGTCTG CGCTGCTCGA GGTCGGCTTT
AGGTTCTGCC ATCAGCATTG GGGACGAGGA CTGGCCGGCG AGGCAATGTG GCGATTGATC
AGCCACGCCT TCGTCGCGTT GGACGCGCAG GCGGTCTGCG CCATCACCAA TCCCAAGAAC
AGCCGGGCGA TCGCTCTTTT ACATCGGCTC GGCTTCAACC AGCACGGATA TGTCGAGGCT
TATGGCTCGG CCGGTCCGTT CTTCGTATGT CTCAGAGATC CATGA
 
Protein sequence
MTTGAIQPVP PLMTERLRLA RRRIADLEDC LAMDMDPRVA AYAFDQIEPH QHRARIRAAI 
AADQDPQLGF WTVRDRSSDQ FVGWVYVKPF QQSALLEVGF RFCHQHWGRG LAGEAMWRLI
SHAFVALDAQ AVCAITNPKN SRAIALLHRL GFNQHGYVEA YGSAGPFFVC LRDP