| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2004 |
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| Symbol | |
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| ID | 3973867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2179829 |
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| End bp | 2180548 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925114 |
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| Product | 3-oxoacid CoA-transferase, subunit B |
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| Protein accession | YP_531879 |
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| Protein GI | 90423509 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.725633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAGA AAACCATCAT CGCCAAGCGT GTGGCGCTGG AACTACACGA CGGCGAGCTC
GTCAATCTGG GCATCGGCCT GCCCACGCTG GTGGCGCGCT ATCTGCCCGA TGACGTTGAG
GTGTTCCTGC AGTCGGAGAA TGGCCTGATC GGCGTCCAGG CATTGCCGGA GGAGGGACTG
GAGGACGACA ACCTCACCGA CGCCGGCGGC GGCCCGATCG GCGCGGTGCC GGGGGCGGCC
GCCTTCGACA GCGCGATGTC GTTCGGGCTG GTTCGCGGCG GGCATCTCGA CGTCACCGTC
CTCGGCGGGC TGCAAGTGGA CCAGCAGGGT CAGCTCGCCA ACTGGATGGT GCCGGGCAAG
ATGGTGCCGG GCATGGGCGG CGCGATGGAT CTGGTGTCGG GCGCCAAGCG GGTGATCGTC
GCCATGCAGC ACTCCGCCAA GGGTCAGTCG AAGATCCTGA AGCGCTGCAC GCTGCCGGTC
ACCTCGGTGC GTCGGGTCGA TCTGATCGTC ACCGACCTCG CCGTTATCGA GCCGACCCCG
GACGGCCTGC TGCTCCGCGA GGTCGCCCCC GGCGTCACCG TCGAACAGGT CATCGTTGCC
ACCGAGGCTG AGCTGATCAT TCCGGTCTAT GTGCCAACGA TGCCGATCGA TGTGGAGACC
GGCGGCAAGG TTGCCGACGT CGCGCCATTG TCGAGCCCAC TGCCAGAGCA AGTCCGTTGA
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| Protein sequence | MDEKTIIAKR VALELHDGEL VNLGIGLPTL VARYLPDDVE VFLQSENGLI GVQALPEEGL
EDDNLTDAGG GPIGAVPGAA AFDSAMSFGL VRGGHLDVTV LGGLQVDQQG QLANWMVPGK
MVPGMGGAMD LVSGAKRVIV AMQHSAKGQS KILKRCTLPV TSVRRVDLIV TDLAVIEPTP
DGLLLREVAP GVTVEQVIVA TEAELIIPVY VPTMPIDVET GGKVADVAPL SSPLPEQVR
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