Gene RPC_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1984 
Symbol 
ID3973775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2160702 
End bp2161196 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID637925095 
Producthypothetical protein 
Protein accessionYP_531860 
Protein GI90423490 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGG ATAACCAAAT CAGACCCGGG GAATTGGCGG CGGACTGGTC CGGCGCCGAT 
GCCGACGTGG TTTTCATCGG CCGGATTCAT ACGCCGTGGT CGGAACTCGC CGACTGTCCG
CGGCATGGCC GCGCCGACGG ACCGCTTTGC CGGATCGAGA TCTTCGAGAC CTGGGGGCCG
GCGCTCGCGG GCCTCGACGA AGGCGCGCTG CTCGAAGTGT TCTATTGGCT GCACCGGTCA
CGGCGCGATC TGTTGCAGCA GTGCCCGCGC AACGACGGCG TCCCGCACGG CACCTTTTCG
ATCCGCTCCC CGATCCGACC CAACCCGATC GGGACCTCGG TGGTCCGCCT GGAAAGCCGC
GACGGCAACA ACCTGTTCGT CCGCGGGCTG GATTGTCTGA ACGGCACCCC GCTGGTCGAT
CTGAAGCCCG ATCGCAAGGT ATTCGTGCCG CTGGCGCCGC CGAAACCCGG AGACTTTCTG
GTCGGCGACG CATGA
 
Protein sequence
MQADNQIRPG ELAADWSGAD ADVVFIGRIH TPWSELADCP RHGRADGPLC RIEIFETWGP 
ALAGLDEGAL LEVFYWLHRS RRDLLQQCPR NDGVPHGTFS IRSPIRPNPI GTSVVRLESR
DGNNLFVRGL DCLNGTPLVD LKPDRKVFVP LAPPKPGDFL VGDA