| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1982 |
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| Symbol | |
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| ID | 3973773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2156857 |
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| End bp | 2157657 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637925093 |
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| Product | TonB-like |
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| Protein accession | YP_531858 |
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| Protein GI | 90423488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.153841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATTCG GCTGGCACGA TCCCGACGCC GGGCCTGACC GCGTGTCGCC GCGCGCCGGA
GTGCGCTGGC TGCTTGCGGC CGTGACGGTC GCGGGACTTC ATGTCGCGGC GGTGATGGCC
GGGTTGAACT GGAAGCCGGC GGAGGCCGCG GGCGATCCGC CGGCCGCGCT GATGATGGAG
CTGGCGCCGC TCGCGGTGGC ACCGGAGTCG ACGGAGCAGG TGGCGCCGGG GCCGCAGCTC
ACAGAGGCGC AACCCGAAGC CGAGCCCGAG CCGGAGGTCC CAGTCGAGGA CAAGCCGCCG
GACATCAAGC TTCCGGACAC CGCCAAGCTG GAGGCCGCCG CCGTGCTGCC GCCGCCGCCG
AAGCCGGAGA AGAAACCGCC GCCGAAGAAA AAACGCGAGG CCGAGCGCAC GAAGCCGATC
AACCCCGACC GCTCCAAAGC GACGCAGACC TCGGCGCCGC CGGCCGCGCA GGCGCAGAGC
GCCGATCGCA TGGCCGCGCC GGCGGCGGGG GCTTCGACGT CGTCGGCTTC AGCGGCGTCG
TGGCGTGGCG CATTGATGGC ACATCTCAAC CGACACAAGC GGTTTCCTCC CGGCGGCGGT
GCCGGCATGG CACAGGTCGC CTTCACGATC GATCGGTCCG GGGAGGTGCG CGCGGCCAGG
TTGGTTGGAT CGTCCGGCGA CGCCGCGCTC GATGCCGAGG CGGTCGGCCT GGTTCGCCGT
GCCAGCCCGG TGCCGCCGCC GCCCGCCAAT GTCGGCGGCT CGTCGATCTC GCTGTCGGTC
CCGGTCAGGT TCAACCGCTG A
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| Protein sequence | MIFGWHDPDA GPDRVSPRAG VRWLLAAVTV AGLHVAAVMA GLNWKPAEAA GDPPAALMME
LAPLAVAPES TEQVAPGPQL TEAQPEAEPE PEVPVEDKPP DIKLPDTAKL EAAAVLPPPP
KPEKKPPPKK KREAERTKPI NPDRSKATQT SAPPAAQAQS ADRMAAPAAG ASTSSASAAS
WRGALMAHLN RHKRFPPGGG AGMAQVAFTI DRSGEVRAAR LVGSSGDAAL DAEAVGLVRR
ASPVPPPPAN VGGSSISLSV PVRFNR
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