Gene RPC_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1941 
Symbol 
ID3973573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2110701 
End bp2111969 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content62% 
IMG OID637925052 
Productsodium/hydrogen exchanger 
Protein accessionYP_531817 
Protein GI90423447 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGC TGTTCGAGAT CTTTACCGTC CTGCTGGTGC TCACAGCCGC GTTCGCCTGG 
CTTAATCACG TCGTATTGGG CCTGCCGAAT CAGATCGGCC TCCTGATGAT GGCGCTCATC
GCCTCGCTGG TGCTGGTCGG CTGCGAACTG ATGTTTCCGC GCGCACCGAT CTTCCACAAC
ATTTCGGACC TGCTGCGCCG CATCGACTTC TCCGATACGC TGCTCAACGG CATGCTCGGT
TTCCTGTTGT TCGCCGGCGC GTTGCAGATC GATCTGTCGC GGCTACGCAA CCGCAAATGG
ATCGTCGCAA CGATGGCCAC GGTCGGCGTA TTCATTTCCA CAGCGCTGAT CGGCATCGGA
TTCTGGTACG CCGCCGAGCT TTTCAACGTG CCGATGCCGT TCACCTGGGC GCTGGTGTTT
GGTGCGCTGA TCAGCCCGAC CGATCCGATC GCCGTGCTAT CGACGCTCAA GACGATCAAG
ATCCCGGAAA CTCTGGAAAT GGACATCTCC GGTGAGGCGC TGTTCAACGA CGGCGTCGGC
GTGGTGCTGT TCACCCTGCT GCTGACGGCC GCGACCACCG CGAGCCACGA ATTCGCAGCA
TTACAATTCG CCCAGATGTT TGCGCTCGAG GCCGGCGGCG GCGCGCTGCT CGGCTTTGCC
ACCGGCTATA TCGCCTATCG CGCGATGCGG GCGTTGGACG ATTATCCCAT CGAGGTGCTG
ATCTCGATTG CATTGGCGAC CGGGACCTAC GCGCTGGCGC TGCGACTACA CCTCAGCGGT
CCGATCGCCG TCGTCGTCTC CGGCGTGCTG ATCGGCAACC GCGGCGCGGA ACTGGCAATG
AGCGACCAAA CCCGGCGTTA TTTGTTCGGC TTCTGGACCC TGATCGACGA GATGTTGAAT
TCAGTGCTGT TTCTGCTGAT CGGAATCGAG GTTCTGGTAC TCGGATTCAA TCTCGCGCTG
GCGCCGCTGG CGCTCGCGGC GATTCCAATC GTGATGGTCG CACGGTTGGT CTCGGTTGCG
GCCCCCGTCG GGCTGCTTCG GCTGGGTTAC AAATTCGAGC ACGGTACCGT GGCGATCCTG
ACCTGGGGCG GCGTGCGTGG CGGCATTTCG GTGGCGCTCG TGCTCGCGAT CGCAGCCAAC
GAATTCAAGC CGGCCCTGAC CGCGGCCACC TACACGGTGG CCGTGTTCAC CATCATCGTG
CAAGGCCTCA GCCTCGGCTG GTTCGTGCAA AGACTTGGCG TTGGCGAACC AAAGCTGCCG
TTGCGCTGA
 
Protein sequence
MLSLFEIFTV LLVLTAAFAW LNHVVLGLPN QIGLLMMALI ASLVLVGCEL MFPRAPIFHN 
ISDLLRRIDF SDTLLNGMLG FLLFAGALQI DLSRLRNRKW IVATMATVGV FISTALIGIG
FWYAAELFNV PMPFTWALVF GALISPTDPI AVLSTLKTIK IPETLEMDIS GEALFNDGVG
VVLFTLLLTA ATTASHEFAA LQFAQMFALE AGGGALLGFA TGYIAYRAMR ALDDYPIEVL
ISIALATGTY ALALRLHLSG PIAVVVSGVL IGNRGAELAM SDQTRRYLFG FWTLIDEMLN
SVLFLLIGIE VLVLGFNLAL APLALAAIPI VMVARLVSVA APVGLLRLGY KFEHGTVAIL
TWGGVRGGIS VALVLAIAAN EFKPALTAAT YTVAVFTIIV QGLSLGWFVQ RLGVGEPKLP
LR