Gene RPC_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1939 
Symbol 
ID3973571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2108368 
End bp2108994 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID637925050 
Producthypothetical protein 
Protein accessionYP_531815 
Protein GI90423445 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTG TCATGACGTC GGACGAATTC GATCGCTGGG AAACCAGATT TTCCAATCCG 
GATTTCGTGT TCGGCACCGC GCCGAATGCG TTCCTGGCCT CGTGCCGCGA TATCTTGCCG
GCCCAAGGAC GCGCGCTGGC GATCGCCGAT GGCGAAGGCC GCAACGGGGT GTTTCTGGCG
CAATGCGGAT TGTCAGTGCT GTCGGTGGAT TTCTCGCCGG CCGCACAACG CAAGGCGCAG
AGCCTCGCCG CAGCAAACGG CGTGTCGATC GAGGTGCTGA CCGCCGATAT CCTGAGCTGG
GATTGGCCGT CGGGCTTCGA CGTCGTCGCC GGGATTTTCT TTCAGTTCGT CGATCCGGAG
CAGCGCCGCT TGGTGTTCGC GAAGATCCGC GCGGCGCTCA ATCCCGGCGG GCTGTTGCTG
CTGCACGGCT ATCGACCGAA GCAACTGGAC TACAAGACCG GCGGGCCAAG CCGGGCTGAA
AACCTCTACA CCCGAGAAAT CCTCGAACAG GCGTTCGGCG ATTTCGACCG CCTGTGCATC
AGCGAGCATG ACAGCGTGAT CAACGAGGGC GCAGGCCACC ATGGCCTCTC GGCGCTGATC
GACCTGATCG GGCGCAAGCC GGGCTGA
 
Protein sequence
MRIVMTSDEF DRWETRFSNP DFVFGTAPNA FLASCRDILP AQGRALAIAD GEGRNGVFLA 
QCGLSVLSVD FSPAAQRKAQ SLAAANGVSI EVLTADILSW DWPSGFDVVA GIFFQFVDPE
QRRLVFAKIR AALNPGGLLL LHGYRPKQLD YKTGGPSRAE NLYTREILEQ AFGDFDRLCI
SEHDSVINEG AGHHGLSALI DLIGRKPG