Gene RPC_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1919 
Symbol 
ID3973475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2091306 
End bp2092094 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637925030 
Producthypothetical protein 
Protein accessionYP_531795 
Protein GI90423425 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTCC AGAGTATCTC CAGCGTGCTG TCCGGCGCGT TGTCGGGCTT CATCCTCGGC 
CTGATCGGCG GCGGCGGCTC GGTCCTGGCG ACGCCGCTAT TGCTCTATGT CGTCGGTGTG
GGCGAGCCTC ACGTCGCGTT GGGCACCGGC GCATTGGCGG TTTCGGTCAA CGCCTATGCG
AATTTGATCG GCCACGCGCT GCGAAAGCAC GTGGTGTGGC GCTGCGCGAT GGTGTTCGCA
CTGGTCGGAA CGGTGGGAGC GCTGATCGGC TCCAGCCTGG GGAAGATCAT CGACGGACAG
CTGTTGCTAT TCCTGTTCGG GATCGTGATG GCGATTATCG CCGGCCTGAT GCTGCGGCCA
CGGCGGATCA CCGCCGCCGA CGCGCCGCCG ATCGACCTGA AGCTGTGCGT CAAAGCCGGG
ATCGCCGCGC TCGCCACCGG CGCGGCCTCC GGCTTGTTCG GCATCGGCGG CGGCTTCCTG
ATCGTTCCGG CGTTGATCCT TTCCACCGGC ATGACAACTC TCAATGCGGT CGGCACTTCG
CTGCTGGCGG TGGGGACATT TGGACTGGCC ACCGCACTCA ATTATTCGCT GACGGGCCTG
ATCGATTGGC GCATCGCCGG GGAATTTCTG GCCGGCGGCC TGGTCGGCGG GCTGGCCGGC
ACGTTGCTGG CAGCCCGGCT CGGCGCCCGC AAGAACACGC TCAGCCGCAT CTTCGCGGTC
GTCGTCTTCA CCGTGGCCGG CTATGTGCTG TATCGTTCAG GCCACGCATT GTGGGCGCGG
CCATCCTGA
 
Protein sequence
MLFQSISSVL SGALSGFILG LIGGGGSVLA TPLLLYVVGV GEPHVALGTG ALAVSVNAYA 
NLIGHALRKH VVWRCAMVFA LVGTVGALIG SSLGKIIDGQ LLLFLFGIVM AIIAGLMLRP
RRITAADAPP IDLKLCVKAG IAALATGAAS GLFGIGGGFL IVPALILSTG MTTLNAVGTS
LLAVGTFGLA TALNYSLTGL IDWRIAGEFL AGGLVGGLAG TLLAARLGAR KNTLSRIFAV
VVFTVAGYVL YRSGHALWAR PS