| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1858 |
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| Symbol | |
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| ID | 3971872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2022536 |
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| End bp | 2023720 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924971 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_531736 |
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| Protein GI | 90423366 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.161292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGTT TGGTACCTAG CGATCGCTTT GCCTTCGGCG TGGTGCCCGG AAGCGCCGTC
TCGGCGATCC TGGCCGAGGC GCTGCCGGAA ATGGTCGACG TGGTGCGCGA CGCCTATCTG
GCGCACGCCG AAGGGCGCGC CAGCAATCCG CGCAGCCACT TCCTGCGGTT CGATGATCGG
CCCACCGACC GCATCATCGC GCTTGCCGCC GATCTGCACG ACGAGCAGCC GGTGGCCGGA
CTGAAATGGA TCGCGAGTTG GCCCGAAACC GTTGCCGCGG GCATGCCGCG GGCCTCCGCC
GTGCTGATCC TCAATCGGCG CGATACCGGA TTTCCGTTTG CGATTCTGGA AGCTTCGATC
ATCAGCGCGG TGCGCACCGC AGCCTCGGCG GTGCTGGCGG CGGAAGCAAT GATCGACACG
ATCAGACCGC GCCCTGCCGA GTCCGTGAAT TCACGGCCGG ACGCAATTGT GCCCGCGCCG
CGTTGCGGAT CATGGGACAT CCAGCAACTC CGATCCCCGC GCGTCCGGAT CGTCTTTCGT
CCTGGCCGGC CGGCGTCTGC GGCAGCATCA GCCATGACGC GGACTATTGC GCGGTCGCCG
TCGCGCAAGC GCGACATCTG CGATCGATCG GAATCGACGT GGAGCAGAAC CGGGCGTTGG
AAGTCGCGCT GCAGGACCAC GTCTGTTCTG CGGAGGAACG ACAATGCTGG CCTCGCTGAC
AATCGTGCGG TGCAGAGCAT TGGGACGCCC TCAGTCTTTC GGCCAAGGAG AGCGTCTACA
AATGCTACTA TCCGCTCGCG CGCCAGTTCC TGGATTTTTG CGACGTCGCC CTTCGCTTCG
ACTTACCAAG CGGTCGTTTC TGTGCGCAGC CGAGGCGAAA CGATCTGCCG TTTGCGGAGC
TGCTGCCGTT GCTGCGCGGC AGCTTCGCCG TCGCGGGTCG GCGGATCGCG ACGGCGGCAT
GGTTGCCGTG CGATCCGCGG CCTTGGTGAT CAGCGTACTG ACCTCGCGGC GAGCGCAGCC
ATCATCGTTC GGTTGCGCCT GAATCGCGCG CGGCCAACCC GCCGATCGCC GACCAATCGA
GGTGTTCGCC ACCTTGCGCC AGCAGCGCAA GAAAGCGGTC GCGCAACAGG CTGGCTACCG
GCATCGGCAC CTGCAAATCG CCGGCGGCGG CCAGCACCAG ACTGA
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| Protein sequence | MTCLVPSDRF AFGVVPGSAV SAILAEALPE MVDVVRDAYL AHAEGRASNP RSHFLRFDDR
PTDRIIALAA DLHDEQPVAG LKWIASWPET VAAGMPRASA VLILNRRDTG FPFAILEASI
ISAVRTAASA VLAAEAMIDT IRPRPAESVN SRPDAIVPAP RCGSWDIQQL RSPRVRIVFR
PGRPASAAAS AMTRTIARSP SRKRDICDRS ESTWSRTGRW KSRCRTTSVL RRNDNAGLAD
NRAVQSIGTP SVFRPRRAST NATIRSRASS WIFATSPFAS TYQAVVSVRS RGETICRLRS
CCRCCAAASP SRVGGSRRRH GCRAIRGLGD QRTDLAASAA IIVRLRLNRA RPTRRSPTNR
GVRHLAPAAQ ESGRATGWLP ASAPANRRRR PAPD
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