| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1823 |
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| Symbol | |
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| ID | 3971818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1973684 |
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| End bp | 1974127 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637924936 |
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| Product | putative phage cell wall peptidase, NlpC/P60 |
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| Protein accession | YP_531701 |
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| Protein GI | 90423331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.199401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.352116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTCAC CAGGATTGAC CCGCGGGGCG ATCGTCGCCG AGGCGCGCAG CTGGATCGGC
ACGCGCTATC GGCATCAGGC CTCGTGCAAG GGCGTCGGCT GCGATTGCTT GGGGCTGGTG
CGGGGGGTGT GGCGGGGCTG CCTCGGCGAC GAGCCGGAAC AGCCTCCGGC CTACGCGCCG
GACTGGGCCG AGGCCGGCGG CGAGGACACC CTCGCCGCGG CGGCGCTGCG GCATCTCACT
CCGATTGCGC GTGAAAAATT CGCCGCCGGC GACGTGCTGC TGTTTCGCTG GCGCGACGAT
TGCGTCGCCA AGCATCTGGC GATCGCCAGC TCCGCGCACG CCATGATCCA CGCCCATGAC
GGCGCCGCGG TCTGCGAGGT GGCGATCGCG CCGTGGTGGC GGCGACGTCT GGCGTTTGCG
TTCTCGTTTC CCGGAGTGAT GTGA
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| Protein sequence | MDSPGLTRGA IVAEARSWIG TRYRHQASCK GVGCDCLGLV RGVWRGCLGD EPEQPPAYAP
DWAEAGGEDT LAAAALRHLT PIAREKFAAG DVLLFRWRDD CVAKHLAIAS SAHAMIHAHD
GAAVCEVAIA PWWRRRLAFA FSFPGVM
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