Gene RPC_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1821 
Symbol 
ID3971816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp1971980 
End bp1972618 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID637924934 
Producthypothetical protein 
Protein accessionYP_531699 
Protein GI90423329 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.071229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.342905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT TTCACGAAAT CCTGTTTCCG CTCGACGTCG CGCTGAAAAG CGCCGGCGGG 
CCGGAGCGGC GCACCGACAT CGTCTCGTTC GGCTCCGGCC GCGAGCAGCG CAACGCGCGC 
TGGGCGCAGT CGCGGCGGCG CTACGACGCC GGCTACGGCG TCAAGACGCT GCAGGCGTTG 
CAGGCGGTGG TGGCGTTCTT CGAGGAGCGC CGCGGCCAGC TCTACGGCTT TCGCTGGCGC 
GACCGGCTGG ATCATTCGTC GAATGCGCAA GGTGGGCCGC CGTCGCCGCT CGACCAGGGC 
ATCGGCATCG GCGACGGCGC AACGGCGACG TTTCAACTGC TGAAGACCTA TGGCGCGGGC 
TTTGCGCCGT ATTCCCGGCC GATCCAGAAA CCTGTGGCGG CAACGGTGCG GGTCGCGGTC 
GGCGGCAGCG AACTCGCCGC CGGCGCGTTC AATTGCGACA CCACGACCGG CATTGTGAGA 
TTCGTCGCTG GACACGTTCC GCCGCCGGGC GCGGCGATCA CCGCGGGATT TTCCTTCGAC 
GTGCCGGTGC GGTTCGACAC CGATTATCTC GAGGTCGATC TGTCGGCGTT CGCCGCCGGC 
GCGATCCCGA AGATTCCGCT GGTCGAGATC AGGGTGTAA
 
Protein sequence
MTGFHEILFP LDVALKSAGG PERRTDIVSF GSGREQRNAR WAQSRRRYDA GYGVKTLQAL 
QAVVAFFEER RGQLYGFRWR DRLDHSSNAQ GGPPSPLDQG IGIGDGATAT FQLLKTYGAG 
FAPYSRPIQK PVAATVRVAV GGSELAAGAF NCDTTTGIVR FVAGHVPPPG AAITAGFSFD 
VPVRFDTDYL EVDLSAFAAG AIPKIPLVEI RV