Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1811 |
Symbol | |
ID | 3971806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1965722 |
End bp | 1966378 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924924 |
Product | hypothetical protein |
Protein accession | YP_531689 |
Protein GI | 90423319 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.603279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.334623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGCCG TGCGCTCATG CTTCCCCCTT TTCACTTCCC ATCATCCTCG AAAGGAGGAC GCCGTGCGAA AAGCTTTGCT TCTGTTGGCG AGCGCCGCCG TGATAACCGG ATCCACGATG TCGGCCGACG CCCGCGACCG TTATCGCGAC CGCGACGATC GCGCCGAGCA GACCACCAAC CAATTGATCA ACGAGGCCGC CGCGCACACC GCACGCATCA AGGTCGATCT GCATTTGACC GCCGACCAGG AAAAGAACTG GCCCGGCTTC GAAAGCGCGT TGGCCGATCT CAACAAGCGG CGGATCGATC GCGCGATGGC GATGCGCGCC GAGCGCAAAG CCGCCGGCGA TGATCGCAGG GAGGCCCGCG ACGAGCGCCG AAACCAGAAT GACGAGCGCC GTGCGACGAA TGACGATCGC CGCGCCACCA ATGACGACCG CACCACCGGC AGCGCCGCTC GCCCCAGCGG CGACGAGACC AACGTGCTCG ACGCCATCAA CCGCGACGCC GACCGCCGCA TCGAACGCGC CAACGACTGG AAGAAACTCA CCGAGGCGGC GCGGCCGCTG TTTGACAGCC TCGACCAGCA GCAGAAGCGC CGCTTTACCG AAATCCTGTA CCAGGGCGAC CGGCAGGGCG ATCGGGACTC CCGCTAA
|
Protein sequence | MRAVRSCFPL FTSHHPRKED AVRKALLLLA SAAVITGSTM SADARDRYRD RDDRAEQTTN QLINEAAAHT ARIKVDLHLT ADQEKNWPGF ESALADLNKR RIDRAMAMRA ERKAAGDDRR EARDERRNQN DERRATNDDR RATNDDRTTG SAARPSGDET NVLDAINRDA DRRIERANDW KKLTEAARPL FDSLDQQQKR RFTEILYQGD RQGDRDSR
|
| |