Gene RPC_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1797 
Symbol 
ID3972062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1954269 
End bp1954619 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content66% 
IMG OID637924910 
Producthypothetical protein 
Protein accessionYP_531675 
Protein GI90423305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.872481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0320282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTATT TCATCGTCAA ATGCCTGCTG TCGGGGGTGA TCGTCGGCGT GGTCTCCGAA 
GTCGCCCGGC GCAGTCCGGG TTTCGGGGCG CTGATCGTGT CGCTGCCGCT GGTCTCGCTG
CTCGGCATCC TGTGGCTGTG GCGCGACACC GGCGACGCGG CGCGGATCGC CGCGCACGCC
GAATCGACGT TCTGGTACGT GCTGCCGTCG TTGCCGATGT TCCTACTGAT GCCGGCGATG
CTGCGCGCCG GCATCGGCTT CTGGCCGACG CTGGCGGCAA GCTGCGTGCT GACCATGCTG
TCGTATCTGG CGATGGTCTG GATGCTGGCG CGGTTCGGGA TGCGACTGTG A
 
Protein sequence
MVYFIVKCLL SGVIVGVVSE VARRSPGFGA LIVSLPLVSL LGILWLWRDT GDAARIAAHA 
ESTFWYVLPS LPMFLLMPAM LRAGIGFWPT LAASCVLTML SYLAMVWMLA RFGMRL