| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1791 |
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| Symbol | |
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| ID | 3972056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1944878 |
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| End bp | 1946038 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924904 |
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| Product | patatin |
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| Protein accession | YP_531669 |
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| Protein GI | 90423299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0415582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TTCCTGTCCG ACTGATTCCC GGCGATTCCG AATCCGAGCA GCCCGAAAAC
GCGCCGGCCT TGTGCCTGTC CGGCGGCGGC TATCGCGCCA TGGTGTTTCA CATCGGCGCG
CTGTGGCGGC TGTATGAGAG CGGCTGGCTC AGCAAGCTTA AGCGGATCTC CAGCGTCTCC
GGCGGTTCGA TCACCGCCGG CTTCCTCGGG CTGCAATGGT CGCAGCTCAG CTTTGCCCCC
GGCACCGTGC AAAGCGAGTT CGTGCCCAAA GTGGTGACGC CGCTGCGGGC GCTGGCATCC
ACCACCATCG ACATCCCGGC GGTGATCCTC GGCCTGCTGC TGCCCGGCGG CGTCGCCGGC
CGGATCGCCA AGGCCTACGA TTCGGCGCTG TTCAACGGCA AGACGCTGCA GGATCTGCCG
GACGCGCCGC GCTTCGTCAT CAACGCCACC AACATGCAGT CCACCGTGCT GTGGCGGTTT
TCCAAGCCGT ATATGTGGGA CTACCGGGTC GGCGAAGTGA AATCGCCGAC GCTGGCGTTG
GCGCAGGCGG TGGCGGCCTC CTCGGCGTTT CCGCCGGTGT TGTCGCCGGC GCGGCTGTCG
CTCAGCAACG CCGATTTCGT GCCGAAAACC GGCGACGACC TGCAGCGGCC GCCATTCACC
ACCGACGTCA TCCTCACCGA CGGCGGGGTC TACGACAATC TCGGGCTGGA AACCGCCTGG
AAGCGCTACA AGACCATCCT GGTCTCCGAC GCCGGCGGCA AGACCGCCGC GGAGGAATCG
CCGCCGACCG ATTGGCTGCG GCAGGCCTAT CGGGTGCTCA ACCTGATCAA CAGCCAGGTC
CGCGCGCTGC GGGTCCGCCA GCTGATCGAT TCCTATCAGC GCGGCGCCGA CAATCCGGAC
GATCCGACCG GGCGCAACGG CACCTATTGG GGGATTCGCG CCGACATCGC CGAGTATCAT
CTGCACGACG CGCTGGATTG CCCGCTGCCG CGCACCACCG AACTGGCCAA CATCGCGACC
CGGCTGGCCC GGCTCGACGA TCTGACCCAG CAACGGCTGA TCAATTGGGG TTATGCGATC
GCCGACGCGG CGTTGCGCAA ATATGTCGAT CCAGACCTGC AGCCCAAGCC GGCGTTTCCC
TATCCGAAGG CAGGGGTCTG A
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| Protein sequence | MSDIPVRLIP GDSESEQPEN APALCLSGGG YRAMVFHIGA LWRLYESGWL SKLKRISSVS
GGSITAGFLG LQWSQLSFAP GTVQSEFVPK VVTPLRALAS TTIDIPAVIL GLLLPGGVAG
RIAKAYDSAL FNGKTLQDLP DAPRFVINAT NMQSTVLWRF SKPYMWDYRV GEVKSPTLAL
AQAVAASSAF PPVLSPARLS LSNADFVPKT GDDLQRPPFT TDVILTDGGV YDNLGLETAW
KRYKTILVSD AGGKTAAEES PPTDWLRQAY RVLNLINSQV RALRVRQLID SYQRGADNPD
DPTGRNGTYW GIRADIAEYH LHDALDCPLP RTTELANIAT RLARLDDLTQ QRLINWGYAI
ADAALRKYVD PDLQPKPAFP YPKAGV
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