| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1786 |
|---|
| Symbol | |
|---|
| ID | 3972225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1938739 |
|---|
| End bp | 1939317 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637924899 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531664 |
|---|
| Protein GI | 90423294 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5402] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.347459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0683375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTGA CATTTTCCAT CCTGATCGCG CTGATCATCG CGGCCGCCAT CGGCGTCGGC
ACGACGTGGA TGACCGCGAC CCGCGGCACC GATCTCAACA CCTTGACCAT CGGCGCCTGG
ACCGCGCGGC CGCGCACCGG CACCGCCGAC ATCGATCCGT ACGCCCGCGC CTCGATCGCG
CGCAGCGGCG AATTGCCGAT CGGCACCGGC GACGGCATCG CCTTCACCGC GACCGCCGAC
GACGCCAAGC GTCTGCTTGA CGGCCGTTGC GACGTGGTGG TGAGCGGGGT TACGCCTGCG
GCGCGGTTTT GGACGCTGAC GCTGTACGAC ACCAAAGGCC GGTTAGTGGC GAATTCGCTA
CAACGCTACG GCTTCACCAG CCAGGAGATC GTGCGCAGTT CGGATGGGGC CTTCGAAGTC
CGGATCGCCT CGCGCGCCCG CGCCGGCAAC TGGCTGCCGA CCGGCGCGAT CGAGCGCTAC
AGCCTGATGC TGCGGCTGTA CGACACCCCG GTCGGCGTGG CGACGCGGAC CCAGCGCGAC
GCGCCGATGC CCGCCATCAA GACGGTGGGC TGCCCATGA
|
|---|
| Protein sequence | MRLTFSILIA LIIAAAIGVG TTWMTATRGT DLNTLTIGAW TARPRTGTAD IDPYARASIA
RSGELPIGTG DGIAFTATAD DAKRLLDGRC DVVVSGVTPA ARFWTLTLYD TKGRLVANSL
QRYGFTSQEI VRSSDGAFEV RIASRARAGN WLPTGAIERY SLMLRLYDTP VGVATRTQRD
APMPAIKTVG CP
|
|---|
| |