| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1745 |
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| Symbol | |
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| ID | 3972457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1897295 |
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| End bp | 1898500 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924858 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_531623 |
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| Protein GI | 90423253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.597218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.101344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA CCGCAACTTC TCCTTTCTCC GATCCGTTGG GCGCCCACAG CGAGGGCGAC
CTGCGCCCTG CCGCGGTCCT GGCGCAACGC GCCAAGCAGC GGCGTCAGAT GCTGGATCTG
GCCGGACTGA GCTACGTCAT CGATGCCGGC GTTCTGCTGA TCTATGCGGC GGCGGGAACC
GTGCCGGCGA TCGTCGGTGC GGCGCTTGCG GGTTGCGGCC TGGCCACGGT GACGCTGTTC
CTGGTGTTGT CGGAATTCGG CTTCGCGGAT CGCTTCCGCG ATCATTACTG CGTGCTTCCG
CAATCCACCA TCAACCTCGT CATCCTGCTG GGGTTCGCGT ATTTCGTCCC GCAGGTCGGG
GTATTGTTTC TGTGCTCGCT GTTCATCGTC TACGGCTTCA GCGCGCTGCG CTCGACGCCG
CGCCAGACGG TGATCGCCTG GAGCCTGATG GCCGTCGGCG TCGGTGCGCT GTTGCTACTG
AGCGAGCGGC CGATTTCGCT GCCGATGGCC ACCCCGCTTG AGCGCTTCGC CACCATGCTG
GTGTTCGTTC TCGCGCTCGG CCGCTGCATG TTCATCGGGG TCGTCTCCAG CGCGCTGCGC
GAAAGGCTCT ACCGGCGCGG CGTCGAACTC AAGGCGACCT ACAAACGCAT CGAAGAGCTC
GCCGAGCTCG ACGAACTCAC CGGGGCGTCC AACCGCCGCT GCATCATGCG GATGCTCGAC
GACGAAATCC TGCGCGCCCG CCGCACCGCG ATGCCGCTGA CCATCGCGCT GATCGACCTC
GACTGGTTCA AGCGGATCAA CGACCTCTAC GGCCATCCCA CCGGCGACGA GGTGCTGCGG
ACGTTTGCGA TCACGATCTT CGCCAACATC CGCAATGTCG ACCGCTTCGG CCGTTACGGC
GGCGAGGAGT TCTTGCTGGT GCTGCCCGAG ACGACGCAGG ACAGCGCCCA GCCGACCCTC
GACCGGCTGC GGCGGATCGT GGCGGATCTC GACTGGAGCG CGTTCTCGCA GGGCATGACG
GTGACGATGT CGGTCGGGAT CGCCTCTTGG TGCAACAATG AAACGCCCGA AGCGTTGCTC
GCCCGCGCCG ACGACGCGCT CTACGAAGCC AAGGCCGATG GCCGCAACCG CGTCGCGCTG
TCGCGCCCGG CGCCGGGCGC TGCGCCGGAC CGGGCGGCGG CGCGGGCGCA CGAGCTCCGA
GTCTGA
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| Protein sequence | MDATATSPFS DPLGAHSEGD LRPAAVLAQR AKQRRQMLDL AGLSYVIDAG VLLIYAAAGT
VPAIVGAALA GCGLATVTLF LVLSEFGFAD RFRDHYCVLP QSTINLVILL GFAYFVPQVG
VLFLCSLFIV YGFSALRSTP RQTVIAWSLM AVGVGALLLL SERPISLPMA TPLERFATML
VFVLALGRCM FIGVVSSALR ERLYRRGVEL KATYKRIEEL AELDELTGAS NRRCIMRMLD
DEILRARRTA MPLTIALIDL DWFKRINDLY GHPTGDEVLR TFAITIFANI RNVDRFGRYG
GEEFLLVLPE TTQDSAQPTL DRLRRIVADL DWSAFSQGMT VTMSVGIASW CNNETPEALL
ARADDALYEA KADGRNRVAL SRPAPGAAPD RAAARAHELR V
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