| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1724 |
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| Symbol | |
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| ID | 3972377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1870473 |
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| End bp | 1871480 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637924837 |
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| Product | peptidase S41 |
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| Protein accession | YP_531602 |
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| Protein GI | 90423232 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0570735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC TGGACCGTCG CTCGTCATTC CTGATCGCCT GCTTCGCGAC AGTTTCCACG
CTTGTGGCGG CGCCGTCGAT GGCCGTTGCC GAGGTTGTTT CCGGTCCGAC GCAAGCCATG
TCCTTGGATC AGACAACGGT CAGGAAGGTG ATTAGCGGCA TCGCTGTGGA GCTGCGCGAA
GGTTATGTGT TCGCGGATAA GGGGGTGCAG GCTGCGGATG CGTTAGAGAA AGCATTGGCA
GGGAACGCCT ATGCCGGCTT GACCGATAAA GCCCAGTTCG CTCTGCGACT GACTGAACAA
CTCCGGGCGA TCACCAAGGA CAGTCATATG AGGGTGATCT TTGGCTCTCC GTTCCGCAAC
CAGCCTCCGC AGGCCGCGCC TCAGGGTGCC GGTTTTGAGG TGAAACGATT GGACGGCAAT
ATCGGATACA TCCACTTGTC GCGGTTCGTG CCCCCCGAAA TCTTCAATCC GGCGGCCAAC
GACGCCATGC GCAGCGTCTC CGATACCGAC GCGCTTCTCA TCGACATCCG GGACAATGGC
GGCGGACACC CGGCATCTGT CGCGTACTTT GTCAGTTTCT TCCTCGATCC GGACAAGCGC
GTTCATATCA ACGACCTCAT CTGGCGCAAT CGTGGCACAT CGACTTTCAG AACGGAGTCG
TTTTGGAGTT CGCCGACGCC GGTATCCTAT CTTGGCAAGC CCGTCTATGT GCTGGTGGGC
TCAAAGACCT ATTCGGCGGG CGAGGAGCTT GCCTACGATT TGCAGGTGCT CAAGCGCGCG
ACCGTGGTCG GCGAACAAAC CCGCGGGGGA GCGAACCCGG GCGGTCTGAC TGACCTCGGT
TCCGACATCT TCGTTGTCGT GCCGACGGGC AGGGCTGAAA ACCCGACCAC GGGCAGCAAT
TGGGGGGGCG TCGGCGTGCG TCCTGACGTT CAGGCCAAGC TTGAGACCAC ACAGGAAACT
GCCGTGGCTC TGGCGAAGGG GCAGCCAGCA GCGCCGTTGG CGAGATAG
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| Protein sequence | MQMLDRRSSF LIACFATVST LVAAPSMAVA EVVSGPTQAM SLDQTTVRKV ISGIAVELRE
GYVFADKGVQ AADALEKALA GNAYAGLTDK AQFALRLTEQ LRAITKDSHM RVIFGSPFRN
QPPQAAPQGA GFEVKRLDGN IGYIHLSRFV PPEIFNPAAN DAMRSVSDTD ALLIDIRDNG
GGHPASVAYF VSFFLDPDKR VHINDLIWRN RGTSTFRTES FWSSPTPVSY LGKPVYVLVG
SKTYSAGEEL AYDLQVLKRA TVVGEQTRGG ANPGGLTDLG SDIFVVVPTG RAENPTTGSN
WGGVGVRPDV QAKLETTQET AVALAKGQPA APLAR
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