Gene RPC_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1708 
Symbol 
ID3972535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1851513 
End bp1851974 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID637924821 
ProductCache, type 2 
Protein accessionYP_531586 
Protein GI90423216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0920811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA AGACGACCCG CCTGCTGTGT TCCGCTATCA TTTCCGCGAT GCTGCCGTTC 
GCAGCTTATG CCGGCGAGGG GGTCGGCAAG GACGACGCCA TCGCCATGGT GAAGAACGCG
GTGACGTTCA TCAAGGAGCA GGGGCCGGAC AAGGCCTATC CGGAAATCAG CGACAAGGCC
GGCAAATTTG TCAAAGGCGA CCTTTACGTC GTGGTCTATC AGCTCGACGG CAAAGTGCTG
GCGCATGGCT CCAATCAGAA ATTCGTCGGC AAGGACATGA TCGACGCCCA GGACGTCGAC
GGCAAACTGT ACGTCAAGGA ACGCGTCGAA CTCGCCGCCA AGCAGCCGTC GTTCTGGCAG
GACTACAAAT TCGTCAATCC GGTCAGCAAG AAGGTCGAGC CGAAGCAGAT GTATTGCGAG
AAGCTGGATA ACACCGCGGT CTGCGCCGGG ATCTACAAAT AG
 
Protein sequence
MSAKTTRLLC SAIISAMLPF AAYAGEGVGK DDAIAMVKNA VTFIKEQGPD KAYPEISDKA 
GKFVKGDLYV VVYQLDGKVL AHGSNQKFVG KDMIDAQDVD GKLYVKERVE LAAKQPSFWQ
DYKFVNPVSK KVEPKQMYCE KLDNTAVCAG IYK