Gene RPC_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1698 
Symbol 
ID3972525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1837811 
End bp1838539 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID637924811 
ProductABC transporter related 
Protein accessionYP_531576 
Protein GI90423206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.937087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC TGGAAATCCG CGACCTCGTG GTGCGCTACG GCGAGATCGA AGCGCTGCGC 
GGGGTGTCGC TCAGCGTCGC GCGGGGCCAG GTGGTGACGC TGCTCGGCGC CAATGGCGCC
GGCAAGTCGA CCACGCTGCG GGCGATCTCC GGGCTCACCA AGCCCGCGTC GGGCGAGATT
CTGTTCGAGG GCAAATCGAT TGCCGGGCTT GGCCCGGAGG CGATCGTGCG GATGGGGATC
AGCCACGTGC CGGAAGGCCG GCGGGTGTTT CCCGGCCTCA CCGTGAAGGA GAACATCATG
CTCGGCGCCT CCAATCGCCG GGTTCGCAAG GCTGAGTTGT CGCGCGAGGC CGATGCGATG
TTCGAGCTGT TTCCGGACAT CCGGAAATTC GCCGATTCGC TGGGCTGGAC CTTGTCGGGC
GGGCAGTTGC AGATGGTGGC GGTGGCGCGC GGGCTGATGG CCAAGCCGCG GCTGTTGCTG
CTCGATGAGC CGTCGCTGGG GCTGGCGCCG GTGATCGTGC AGGCGGTGTT CCGAATCATC
TCGGAGATTC GCCGCACCAC CACCGTGCTG CTGGTCGAGC AGAATGCGCG CATGGGCCTC
TCCGTTGCCG ACACTGGCTA TGTGCTGGAG ACCGGGCGTA TCGTGCTCGG CGGCCAGCCC
GACGAGTTGT GGGGCAATGA AGCCATCGCC GCGGCCTACC TCGGCGGCCA CGCCAGGGTC
CGCGCTTAA
 
Protein sequence
MPLLEIRDLV VRYGEIEALR GVSLSVARGQ VVTLLGANGA GKSTTLRAIS GLTKPASGEI 
LFEGKSIAGL GPEAIVRMGI SHVPEGRRVF PGLTVKENIM LGASNRRVRK AELSREADAM
FELFPDIRKF ADSLGWTLSG GQLQMVAVAR GLMAKPRLLL LDEPSLGLAP VIVQAVFRII
SEIRRTTTVL LVEQNARMGL SVADTGYVLE TGRIVLGGQP DELWGNEAIA AAYLGGHARV
RA