Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1698 |
Symbol | |
ID | 3972525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1837811 |
End bp | 1838539 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637924811 |
Product | ABC transporter related |
Protein accession | YP_531576 |
Protein GI | 90423206 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.937087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC TGGAAATCCG CGACCTCGTG GTGCGCTACG GCGAGATCGA AGCGCTGCGC GGGGTGTCGC TCAGCGTCGC GCGGGGCCAG GTGGTGACGC TGCTCGGCGC CAATGGCGCC GGCAAGTCGA CCACGCTGCG GGCGATCTCC GGGCTCACCA AGCCCGCGTC GGGCGAGATT CTGTTCGAGG GCAAATCGAT TGCCGGGCTT GGCCCGGAGG CGATCGTGCG GATGGGGATC AGCCACGTGC CGGAAGGCCG GCGGGTGTTT CCCGGCCTCA CCGTGAAGGA GAACATCATG CTCGGCGCCT CCAATCGCCG GGTTCGCAAG GCTGAGTTGT CGCGCGAGGC CGATGCGATG TTCGAGCTGT TTCCGGACAT CCGGAAATTC GCCGATTCGC TGGGCTGGAC CTTGTCGGGC GGGCAGTTGC AGATGGTGGC GGTGGCGCGC GGGCTGATGG CCAAGCCGCG GCTGTTGCTG CTCGATGAGC CGTCGCTGGG GCTGGCGCCG GTGATCGTGC AGGCGGTGTT CCGAATCATC TCGGAGATTC GCCGCACCAC CACCGTGCTG CTGGTCGAGC AGAATGCGCG CATGGGCCTC TCCGTTGCCG ACACTGGCTA TGTGCTGGAG ACCGGGCGTA TCGTGCTCGG CGGCCAGCCC GACGAGTTGT GGGGCAATGA AGCCATCGCC GCGGCCTACC TCGGCGGCCA CGCCAGGGTC CGCGCTTAA
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Protein sequence | MPLLEIRDLV VRYGEIEALR GVSLSVARGQ VVTLLGANGA GKSTTLRAIS GLTKPASGEI LFEGKSIAGL GPEAIVRMGI SHVPEGRRVF PGLTVKENIM LGASNRRVRK AELSREADAM FELFPDIRKF ADSLGWTLSG GQLQMVAVAR GLMAKPRLLL LDEPSLGLAP VIVQAVFRII SEIRRTTTVL LVEQNARMGL SVADTGYVLE TGRIVLGGQP DELWGNEAIA AAYLGGHARV RA
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