| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1697 |
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| Symbol | |
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| ID | 3972524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1836030 |
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| End bp | 1837811 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924810 |
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| Product | ABC transporter related |
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| Protein accession | YP_531575 |
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| Protein GI | 90423205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.777579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.764818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG GCAGCGACAA CATGCCGCTC GCGGTCGCGG CGTTGCGCGG CAAGCCGCTG
CTGTTGCGGC ATCTGCCGTA TTTCCTCGGC GCGGCGATCG TGGTGGCGCT GGCCGCCACC
GTCAGCTTCG ACGGCTATAT CCTCAACATT CTGATGCAGG CGACGACGTT TGCGATCGCG
GTGTTCGGGC TGTCGGTGGT GCTCGGGCTG TGCGGCCAGA TCAATCTGGC ACAGGCGGCG
TTCTTCGGCT TCGGCGCCTA TGCGGTCGGC ATCGGCACCA CGGATTTCCA ACTGAGCTAT
TGGCTGTGCC TCGCCGCCGG CTGCGGCATC GCGCTATTGG CCGGCGCGGT GCTGGGCGCC
TCGACGCTGC GGCTCGGCGG GCACTACTTG GCGATGGTGA CGATCTCGTT CCAGCAGATC
GTCACGCTGG TGATGATCAA CGCGATCTGG CTGACCCACG GGCCGGACGG CGTCGGCCGC
ATCGGTCGCC CGGCGCTGTT TCAATCGTCG CAGGCCTATC TGGCGTTCTG CGTCGCGATG
CTGGCGCTGG TCGGCTATTT CGTCTGGCAT CTGCCGGACA CAAGGCTCGG CCGCGCGATG
CGCGCGGTGC GCGACAACGA ACTCGCCGCC GGCGTCGCCG GCATCGACGT GTTTCGCACC
AAGGTCTATG CGTTTGCGCT GAGCGCGGTG CTGGGCGGAT TGGCCGGCGG GCTGTTCGCC
GGCGGGTTCT CCTACATCAG CCCGGATCAG TTCTCGTTCG CCGAATCCAT CGTGTTCCTG
ACCATGTCGC TGCTCGGCGG CGGGGCGTCG CCGATCGGTT CGGCGATCGG CACCGCGCTG
TTGATCCTGA TCCCGGAATG GCTGCGCTTC CTGAAGAGCG TGCCGGGACT CTACCTCGCC
ATCTACGGGC TGTCGGTGAT CCTGATCATC CGCTTCATGC CGGACGGCAT CTGGGGCTTC
GTCAACGCCG CGACGCAGCG CTGGCGCGCC AAGGCCAAGC TGCACGCCGC CGGTCCGCCG
CTGCAATTGT CGCCGGCCCA TGTCGGCGGC GACATCGTGC TGCAGGTCAC CGGGCTCGCG
AAATATTTCG GCGGCTTGAA GGCGGTGGAC AATGTCGACA TCGCGGTGAA GCGCGGCGGC
GTGCACGCGC TGATCGGGCC GAACGGGTCC GGCAAGACCA CGACGTTGAA CGTGCTGTCG
GGGCTGTATC GCGCGACCGC CGGTGAGGTG CTGCTCGACG GCACCGACGT CACCACCATG
CCGCCGCATC TGCGCGCCGC GGCCGGGCTC GGCCGCACCT TCCAGAACAT CCGGCTGTTC
CGCTCGATGA CCGCGCTGGA GAACGTGGTG ATCGGCGCCG AGCGGCCCGG CAACACGCTG
ATCGGCAACG GCGGCGACGC CGCCTTGCAT CAGCGCGCGA TGTCGGCGCT GGCGTTCGTT
GGCTTAGGTG CCCGCGCCAA CGAATTGATC TCCAGCTTTT CCTACGGCCA CCAACGGCTG
ATCGAAATCG CCCGCGCGCT GGCGGCGAAC CCGACGCTGT TGCTGCTCGA TGAGCCGGCC
GCCGGGCTCA ACTCCAGCGA AAAGCTCGAA CTGCATGAAT TGCTGAAGCG CATCGCCGCC
CAAGGCCTCA CCATCCTGAT CATCGACCAC GACATGACGC TGGTGTCGGA GGCGGCGCAG
CACATCACCG TGCTGAATTT CGGCCGCCGC ATCGCCGACG GCGAATCGAT GGCGGTGCTG
CGCCATCCCG ACGTGGTCTC CGCCTATCTC GGGAGCGAAT GA
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| Protein sequence | MSAGSDNMPL AVAALRGKPL LLRHLPYFLG AAIVVALAAT VSFDGYILNI LMQATTFAIA
VFGLSVVLGL CGQINLAQAA FFGFGAYAVG IGTTDFQLSY WLCLAAGCGI ALLAGAVLGA
STLRLGGHYL AMVTISFQQI VTLVMINAIW LTHGPDGVGR IGRPALFQSS QAYLAFCVAM
LALVGYFVWH LPDTRLGRAM RAVRDNELAA GVAGIDVFRT KVYAFALSAV LGGLAGGLFA
GGFSYISPDQ FSFAESIVFL TMSLLGGGAS PIGSAIGTAL LILIPEWLRF LKSVPGLYLA
IYGLSVILII RFMPDGIWGF VNAATQRWRA KAKLHAAGPP LQLSPAHVGG DIVLQVTGLA
KYFGGLKAVD NVDIAVKRGG VHALIGPNGS GKTTTLNVLS GLYRATAGEV LLDGTDVTTM
PPHLRAAAGL GRTFQNIRLF RSMTALENVV IGAERPGNTL IGNGGDAALH QRAMSALAFV
GLGARANELI SSFSYGHQRL IEIARALAAN PTLLLLDEPA AGLNSSEKLE LHELLKRIAA
QGLTILIIDH DMTLVSEAAQ HITVLNFGRR IADGESMAVL RHPDVVSAYL GSE
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