Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1697 |
Symbol | |
ID | 3972524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1836030 |
End bp | 1837811 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924810 |
Product | ABC transporter related |
Protein accession | YP_531575 |
Protein GI | 90423205 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.777579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.764818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG GCAGCGACAA CATGCCGCTC GCGGTCGCGG CGTTGCGCGG CAAGCCGCTG CTGTTGCGGC ATCTGCCGTA TTTCCTCGGC GCGGCGATCG TGGTGGCGCT GGCCGCCACC GTCAGCTTCG ACGGCTATAT CCTCAACATT CTGATGCAGG CGACGACGTT TGCGATCGCG GTGTTCGGGC TGTCGGTGGT GCTCGGGCTG TGCGGCCAGA TCAATCTGGC ACAGGCGGCG TTCTTCGGCT TCGGCGCCTA TGCGGTCGGC ATCGGCACCA CGGATTTCCA ACTGAGCTAT TGGCTGTGCC TCGCCGCCGG CTGCGGCATC GCGCTATTGG CCGGCGCGGT GCTGGGCGCC TCGACGCTGC GGCTCGGCGG GCACTACTTG GCGATGGTGA CGATCTCGTT CCAGCAGATC GTCACGCTGG TGATGATCAA CGCGATCTGG CTGACCCACG GGCCGGACGG CGTCGGCCGC ATCGGTCGCC CGGCGCTGTT TCAATCGTCG CAGGCCTATC TGGCGTTCTG CGTCGCGATG CTGGCGCTGG TCGGCTATTT CGTCTGGCAT CTGCCGGACA CAAGGCTCGG CCGCGCGATG CGCGCGGTGC GCGACAACGA ACTCGCCGCC GGCGTCGCCG GCATCGACGT GTTTCGCACC AAGGTCTATG CGTTTGCGCT GAGCGCGGTG CTGGGCGGAT TGGCCGGCGG GCTGTTCGCC GGCGGGTTCT CCTACATCAG CCCGGATCAG TTCTCGTTCG CCGAATCCAT CGTGTTCCTG ACCATGTCGC TGCTCGGCGG CGGGGCGTCG CCGATCGGTT CGGCGATCGG CACCGCGCTG TTGATCCTGA TCCCGGAATG GCTGCGCTTC CTGAAGAGCG TGCCGGGACT CTACCTCGCC ATCTACGGGC TGTCGGTGAT CCTGATCATC CGCTTCATGC CGGACGGCAT CTGGGGCTTC GTCAACGCCG CGACGCAGCG CTGGCGCGCC AAGGCCAAGC TGCACGCCGC CGGTCCGCCG CTGCAATTGT CGCCGGCCCA TGTCGGCGGC GACATCGTGC TGCAGGTCAC CGGGCTCGCG AAATATTTCG GCGGCTTGAA GGCGGTGGAC AATGTCGACA TCGCGGTGAA GCGCGGCGGC GTGCACGCGC TGATCGGGCC GAACGGGTCC GGCAAGACCA CGACGTTGAA CGTGCTGTCG GGGCTGTATC GCGCGACCGC CGGTGAGGTG CTGCTCGACG GCACCGACGT CACCACCATG CCGCCGCATC TGCGCGCCGC GGCCGGGCTC GGCCGCACCT TCCAGAACAT CCGGCTGTTC CGCTCGATGA CCGCGCTGGA GAACGTGGTG ATCGGCGCCG AGCGGCCCGG CAACACGCTG ATCGGCAACG GCGGCGACGC CGCCTTGCAT CAGCGCGCGA TGTCGGCGCT GGCGTTCGTT GGCTTAGGTG CCCGCGCCAA CGAATTGATC TCCAGCTTTT CCTACGGCCA CCAACGGCTG ATCGAAATCG CCCGCGCGCT GGCGGCGAAC CCGACGCTGT TGCTGCTCGA TGAGCCGGCC GCCGGGCTCA ACTCCAGCGA AAAGCTCGAA CTGCATGAAT TGCTGAAGCG CATCGCCGCC CAAGGCCTCA CCATCCTGAT CATCGACCAC GACATGACGC TGGTGTCGGA GGCGGCGCAG CACATCACCG TGCTGAATTT CGGCCGCCGC ATCGCCGACG GCGAATCGAT GGCGGTGCTG CGCCATCCCG ACGTGGTCTC CGCCTATCTC GGGAGCGAAT GA
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Protein sequence | MSAGSDNMPL AVAALRGKPL LLRHLPYFLG AAIVVALAAT VSFDGYILNI LMQATTFAIA VFGLSVVLGL CGQINLAQAA FFGFGAYAVG IGTTDFQLSY WLCLAAGCGI ALLAGAVLGA STLRLGGHYL AMVTISFQQI VTLVMINAIW LTHGPDGVGR IGRPALFQSS QAYLAFCVAM LALVGYFVWH LPDTRLGRAM RAVRDNELAA GVAGIDVFRT KVYAFALSAV LGGLAGGLFA GGFSYISPDQ FSFAESIVFL TMSLLGGGAS PIGSAIGTAL LILIPEWLRF LKSVPGLYLA IYGLSVILII RFMPDGIWGF VNAATQRWRA KAKLHAAGPP LQLSPAHVGG DIVLQVTGLA KYFGGLKAVD NVDIAVKRGG VHALIGPNGS GKTTTLNVLS GLYRATAGEV LLDGTDVTTM PPHLRAAAGL GRTFQNIRLF RSMTALENVV IGAERPGNTL IGNGGDAALH QRAMSALAFV GLGARANELI SSFSYGHQRL IEIARALAAN PTLLLLDEPA AGLNSSEKLE LHELLKRIAA QGLTILIIDH DMTLVSEAAQ HITVLNFGRR IADGESMAVL RHPDVVSAYL GSE
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