| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1685 |
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| Symbol | |
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| ID | 3972745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1824050 |
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| End bp | 1825366 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924798 |
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| Product | OmpA/MotB-like porin |
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| Protein accession | YP_531563 |
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| Protein GI | 90423193 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTTC TGCTCACGCA TTATTGGATG TGGCTGGCAG CCGCCCTTGT TGCCGGCGCG
GCCACGCCGT TCTTGGCGAA CCGGTTCGGT TGGGCCGCGG ATCTGCCGGA CTACTGGATC
AAGCGCGTCG GCGTCGTGCT GGCGATTCCG TTGGTATTGA TCGCAACGCA ACTGATCGGT
GGCAAGGCCG AGATCCTGCT CGAAGCCGGC TTCGCCGTGG CGGTGGCCTA TGTGATCGGC
GGCCTGGCCG GCGCCAGCGT GGGACTTTTG CCGGTGCGCT ACGAAGGCTG GTGGGTCGGG
CTGTTCGCGA GCGGTTTGAT CTGGGTGGTG TTTGCGATCG TGGCGTTGCC CGGCCTCGAC
AAGGATCTGC GCGAGCGCGT CGCCACGGCG GTCGAGACCG CGGGCGGCGA TCCGCTCAAT
CTCGACGTCG CCGGCCGCGA CGTGCTGCTG CCGGCCGATG TCGACGCGAC GAAGCGCGCC
GAGCTGACCA CGCAAATTCT CGCGGTGCCC GGCGTGCGGC GGGTCTCGGA CGTCGACGAT
CTCTCTGGTC CGGCGCTGTC GGCCAAGACC ATCGCCAAGC TGACCGCCGA AGCCAAGGCC
GCGGAAGCCG CGGCGCAGGA AGCTGCCGCC AAGGAAGCCG CCGCCAAGGA AGCTGCGGCC
AAGGAAGCCG CCGCGCATCA GGCGATGACC AAGGCGGCGC AACGCGAAGC CGCGGCCAAG
GAAGCGGCTG CGAAGGAGGC TGCGGCTAAG GAGGCCGTTG CGAAGGAGGC TGCTGCGAAG
GAGGCTGCGG CCAAGGAAGC GGCTGCCAAA GAAGCCGCGG CGAGGGAAGC CGTCGCGAAG
GAAGCCGCCG CCAAGGCTGA GGCGGAGGCC GCGGCCAAAG CGTCGGAGGG CCACGCGCAT
CAGCAGCTTG CCACCGCGGA TGCCGAAAGC ATGCCGGCGA AGCAGCCCGA CGCCGCGGTC
GGCGCCAAGA CCGCCGCGCT GCTCGACGCC AAGGCTTGCC AGCAGAAACT TTCCGCGGTG
ATCGCCGAGG ACAAGATCAG CTTCGAGCCG AAGAGCGCCG AACTCAGCAA GGCCTCGCTC
GCGGCGCTGA CGAAGCTCGG CTCGGCCATC GCGCTGTGCC AGCCGGTGCA GATCGAGGTC
GCGGGGCCGT TCGACGGCGG CAGCAAGAAG GCTTTGAGGC TGTCGCAGAA GCGCGCCGAG
GCGGTGGTCG GGAGCCTCAG CAAGCTCGGC GTCGGCGCCG CGAAGCTGAC CGCGGTCGCC
GCCGTCAAGC CGGCCGACGG CGGCAAGAGC GGCCCGATCG CGCTGGTGGT GAAATGA
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| Protein sequence | MLFLLTHYWM WLAAALVAGA ATPFLANRFG WAADLPDYWI KRVGVVLAIP LVLIATQLIG
GKAEILLEAG FAVAVAYVIG GLAGASVGLL PVRYEGWWVG LFASGLIWVV FAIVALPGLD
KDLRERVATA VETAGGDPLN LDVAGRDVLL PADVDATKRA ELTTQILAVP GVRRVSDVDD
LSGPALSAKT IAKLTAEAKA AEAAAQEAAA KEAAAKEAAA KEAAAHQAMT KAAQREAAAK
EAAAKEAAAK EAVAKEAAAK EAAAKEAAAK EAAAREAVAK EAAAKAEAEA AAKASEGHAH
QQLATADAES MPAKQPDAAV GAKTAALLDA KACQQKLSAV IAEDKISFEP KSAELSKASL
AALTKLGSAI ALCQPVQIEV AGPFDGGSKK ALRLSQKRAE AVVGSLSKLG VGAAKLTAVA
AVKPADGGKS GPIALVVK
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