| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1677 |
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| Symbol | |
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| ID | 3972737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1811773 |
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| End bp | 1812645 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924791 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_531556 |
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| Protein GI | 90423186 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATG ATCAGCTTCT GGCCGGCCGG CGCATCCTCG TCACCGGCGG CGGCACCGGG
CTCGGCAAGG CGATGGCGGC GAAATTCCTC AGCCTCGGCG CCGAGCTGCA CATCTGCGGC
CGCCGCAAGG GCGTTTGCGA CGAGACCGCG ACCGAGCTGA TGGACGAATT CGGCGGCAAG
GTGATGAGCT ACGGCGTCGA CATCCGCGAC GCCGGTGCGG TCGACCACAT GGTCGAGAGC
ATCTTCGAAG AAGCGCCGCT GACCGACCTG ATCAACAACG CCGCCGGAAA TTTCATCTCG
CGGACGCAGG ATCTCACCCC GCGCGGCTTC GACGCGGTGG CCAACATCGT GATGCACGGC
ACCTTCTACA TGACCCACGC GGTCGGCAAA CGCTGGATCG CGGGCGGCGA TCGCGGCAAT
GTAGTGTCGA TCACCACCAC CTGGGTGCGC AACGGCAGCC CCTATGTGGT GCCCTCGGCG
ATGAGCAAAT CGGCGATCCA CGCCATGACG ATGTCGCTCG CCGCCGAATG GGGCCGCTAC
GGCATCCGGC TCAATACAAT TGCGCCCGGC GAAATTCCCA CCGAGGGCAT GAGCAAGCGC
ATCAAGCCCG GCGACGAGGC CGGCGCCAAC ACCATCCGGA TCAATCCGAT GGGCCGGGTC
GGCACGCTTT CGGAATTGCA GAACGTCGCG GTGTTCCTGA TTTCCGGCGG CTGCGACTGG
ATCAACGGCG AAACCATCGC GATGGACGGC GGCCAGGCCT TGGCGAGCGG CGGCAATTTC
TATCAGCTGC GCGACTGGAG CGACGGCGAG TGGGCGGAGG CGCGCGATGC CATCAAGGCG
CAGAACGACA AGGACCGCGC CGCGCGCGGC TGA
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| Protein sequence | MFNDQLLAGR RILVTGGGTG LGKAMAAKFL SLGAELHICG RRKGVCDETA TELMDEFGGK
VMSYGVDIRD AGAVDHMVES IFEEAPLTDL INNAAGNFIS RTQDLTPRGF DAVANIVMHG
TFYMTHAVGK RWIAGGDRGN VVSITTTWVR NGSPYVVPSA MSKSAIHAMT MSLAAEWGRY
GIRLNTIAPG EIPTEGMSKR IKPGDEAGAN TIRINPMGRV GTLSELQNVA VFLISGGCDW
INGETIAMDG GQALASGGNF YQLRDWSDGE WAEARDAIKA QNDKDRAARG
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