Gene RPC_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1656 
Symbol 
ID3972579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1791182 
End bp1792096 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID637924772 
Productalpha/beta hydrolase fold 
Protein accessionYP_531537 
Protein GI90423167 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG TTCCGCATCA GCCGCCGCAA CTGGCCAAGG CCAACGGTAT CGAGGTCTGC 
TACGAGATCT TCGGCGCCAC CGATGCCGAG CCGCTGCTCC TGATCATGGG GCTCGGCGCC
CAGATGATCC TGTGGGACGA TGAGTTCTGC CGGCAGCTCG CCCACCGCGG CTTCCGGGTG
ATCCGCTTCG ACAACCGTGA CATCGGCCAT TCCAGCAAGT TCTCCGGTGA GAAGCGGCTG
ACCGCGACGG AGTTGTTCAA GCAGCGCTTC CTGCACATTC CGATCGCCGC GCCCTATCGG
CTGCAGGACA TGGCCAACGA TGTGGCCGGC CTGCTCGACG CACTCGGCAT CGCTTCGGCG
CATATCGTCG GCGCCTCAAT GGGCGGCATG ATCGCGCAGG AAACCGCGAT CCTGCATCCA
GAGCGGGTGC GCACGCTGAC CTCGATCATG TCGACCACCG GCAATCCGCG GCTGCCCTAT
CCGACCCGCG AGGCCGCCGC GATGCTGATG GCGCCGCCGC CGACCACCCG CGAGGCCTAC
ATCGCCCGTT TCGCGCAGAC CTGGAAGGTG CTGCGGGTCG GTCACTTTCC GCAGGACGAA
GCCAAGGACC GCGAACGCGC CGAGCGCAGT TTCGCGCGCG GGCTCAATCC GGCGGGCGTG
GCACGGCAGT TGCGCGCGGT GCTGGCGTCG GGCAATCGCA GGGCGCGGCT GCGTCAGATC
AAGGCGCCAA CCCTGGTCAT CCACGGCAGC GTCGATCCGT TGGTGCGCCC GGCGGCCGGC
AAGGACACCG TGGCGGCGAT CCCCGGCGCC AAGTGGCTGT TGATCGACGG CATGGGCCAC
GCGCTGCCGA TGCCGATGTG GCGCACCATC ATCGAGGCGA TCGCCAAACA CGCGCATGGG
GCAAAAGCGG CGTGA
 
Protein sequence
MNDVPHQPPQ LAKANGIEVC YEIFGATDAE PLLLIMGLGA QMILWDDEFC RQLAHRGFRV 
IRFDNRDIGH SSKFSGEKRL TATELFKQRF LHIPIAAPYR LQDMANDVAG LLDALGIASA
HIVGASMGGM IAQETAILHP ERVRTLTSIM STTGNPRLPY PTREAAAMLM APPPTTREAY
IARFAQTWKV LRVGHFPQDE AKDRERAERS FARGLNPAGV ARQLRAVLAS GNRRARLRQI
KAPTLVIHGS VDPLVRPAAG KDTVAAIPGA KWLLIDGMGH ALPMPMWRTI IEAIAKHAHG
AKAA